Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2057g00009 ATGATTGAGAAGGAGGCAAATCAAGCACCGGTGAGTTGTGAAGCCATAGAAGCCGAGAGTACCGTGCAGGAAAAAGTATACATAGGGGTGAGGAAGAGACCTTGGGGGAAATTTGCAGCAGAGATCAGAGACACGACCAGGAATGGGACCAGAGTTTGGCTGGGAACGTTCGAGACTGCGGAGGAGGCTGCTCTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCCACAACGCCGTTCTTAATTTTCCTGTGGAAAAGGTGAAGGAGTCTCTGCAACACATCAAGTATGGCTGTCCCAAAGGGTGTTCGCCTGCTTTGGCCCTCAAAGAGAGGCACTACATCCAAAGAAAACTCTCGTCAAGGGCAAAGAAAGACAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTGGAGGACTTGGGTGTAGAGTATCTGGAGCAACTTCTCAGTATATCTGATCAAACTACAAGCTAG 474 0.4937 MIEKEANQAPVSCEAIEAESTVQEKVYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFETAEEAALAYDQAAFTMRGHNAVLNFPVEKVKESLQHIKYGCPKGCSPALALKERHYIQRKLSSRAKKDKAKQQSEVVVLEDLGVEYLEQLLSISDQTTS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2057g00009 157 SUPERFAMILY DNA-binding domain 26 86 IPR016177 GO:0003677
Pral2057g00009 157 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Pral2057g00009 157 Pfam AP2 domain 26 77 IPR001471 GO:0003700|GO:0006355
Pral2057g00009 157 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Pral2057g00009 157 CDD AP2 27 85 IPR001471 GO:0003700|GO:0006355
Pral2057g00009 157 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Pral2057g00009 157 PRINTS Ethylene responsive element binding protein signature 50 66 IPR001471 GO:0003700|GO:0006355
Pral2057g00009 157 FunFam Ethylene-responsive transcription factor 2 25 86 - -
Pral2057g00009 157 PANTHER DNA-BINDING DOMAIN 18 150 IPR044808 GO:0003700|GO:0009873
Pral2057g00009 157 SMART rav1_2 26 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2057g00009 Pral-Chr2057 51309 51809 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2057g00009 2 155 AP2-EREBP Transcription Factor Family AT3G23240 53.459 2.85e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral2057g00009 AP2 7.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2057g00009 K14516 - gmx:100527364 218.009