Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2057g00007 ATGGAACAGTTGCAGAACAAAACCGGCAAGGAAGACGAAGCAAAAGAAAGCAAGTACAGAGGAGTACGAAGGCGGCCGTGGGGGAAGTTCGCGGCAGAGATTCGAGATTCGAACAGGCACGGAGCTCGATTGTGGCTGGGCACTTTCAACACGGCAGAAGAAGCGGCGAGAGCCTATGATCGTGCTGCTTTCGGCATGAGAGGGCCTTCGGCCATTCTCAACTTCCCAGAAGAATATGGTTTGAGCGGTGCGGGGAGTGCCTGTTCCAGTAGTAGCCACCTGCATCGCTCTTCATCGTCGTCTGCTTCGTCGTCGTCTTCAATGGCGGACGCTCAGGGTGGAAGACAGGTGTTCGAATTCGAGTGTTTGGATGATAAATTGCTAGAGGACCTTCTTGATTATTCGACCAAGAACGAAGAGTAA 423 0.5248 MEQLQNKTGKEDEAKESKYRGVRRRPWGKFAAEIRDSNRHGARLWLGTFNTAEEAARAYDRAAFGMRGPSAILNFPEEYGLSGAGSACSSSSHLHRSSSSSASSSSSMADAQGGRQVFEFECLDDKLLEDLLDYSTKNEE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2057g00007 140 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Pral2057g00007 140 MobiDBLite consensus disorder prediction 1 21 - -
Pral2057g00007 140 SUPERFAMILY DNA-binding domain 17 77 IPR016177 GO:0003677
Pral2057g00007 140 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Pral2057g00007 140 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
Pral2057g00007 140 MobiDBLite consensus disorder prediction 82 110 - -
Pral2057g00007 140 FunFam Ethylene-responsive transcription factor 2 17 77 - -
Pral2057g00007 140 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Pral2057g00007 140 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Pral2057g00007 140 MobiDBLite consensus disorder prediction 84 110 - -
Pral2057g00007 140 PANTHER DNA-BINDING DOMAIN 10 133 IPR044808 GO:0003700|GO:0009873
Pral2057g00007 140 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Pral2057g00007 140 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2057g00007 Pral-Chr2057 27722 28144 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2057g00007 15 133 AP2-EREBP Transcription Factor Family AT3G23230 63.025 1.21e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2057g00007 AP2 1.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2057g00007 - - mnt:21393112 137.117