Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2056g00004 ATGGGAAAGATGGAGGTTATATTCAATGCTCGAGATCTCATGACCAGTTCGTTGCTGAAGAAGATGAGTCTATACTTCCAAGTTTGGCAACAAACTCTTCAACTCCCCAACCTCTCTCCCTCCTCCAGTCTTTCAGGAGAGTTGGGTGATACCTTCTTGGAGAAGTTTTTGGGCTTCATAATGGCTTTGTATAATGGAAACAAGCAAAAATTCCAAATCCTTGTGATGGCGCCTGATGCTGATGGAGTTGGCTGTTCTTCAAGATCTTCTGGTTCAACTAAGAGATGGAAGTATGATGTGTTTTTGAGCTTTCGAGGGGAAGATACCCGGAAAAATTTTACTGATCATTTGTATGCTGCTTTAAAAAACGAAGGATTAAGAACTTTTCGGGATGAGGAAGGACTTGAAAGGGGAGAATCTATTAATCCAAGTTTAGTAGAAGCAATTGAAGAATCTCGTTCTGCAATTATTGTGCTCTCTCCAAATTATGCTTCTTCAACTTGGTGTTTGGATGAGCTTCAAAAGATCCTACAGTTAAAGGAAGAGACAAGTCTTCAAGTATTTCCAATATTTTACGGTGTAGATCCTTCTGATGTTAGGAAACAAAACGGAAGATTTGCAGAAGCCTTCATAAGGCATGAAGAAAGATTTGTCAAAGACAAAACGCAGGAATGGAGGGATGCTTTAAAAGAAGTTGCTACATTATCTGGTTGGGACTCAAAAAACCGGTATGAAACAGAATTCATTGAAAGCATTGCTGATGAAATCGGGTCAAAGTTACTTGATAAATCAGCATCTGATCTTGGCAAGTTAATTGGAATTGAACCAAAATTAGATGAACTGAATTCAATCATAGCAAGGGAATCAGAAGAAGTTGGGTTTATAGGAATATGGGGTGCAGGAGGCGTAGGCAAAACAACTCTTGCTAGAGCCTTTTATGAGCGAGAACGAAAGCGAAAGAGCAAAAACTTTGAGATTCACTGCTTCCTTGATAATATTAGAGAGGCATGTGAAAAAGATGGTTTGATTTCGTTGCAAAGAAAACTTCTTTTATCTTTGTACAAAAGGAGTATAGAAGTGGCTGATTTTTATGAAGCAATGGAGTTGATAAAAAGGAAGTTAACCGACAGAGAAATTCTACTTGTCCTTGATGATGTGAGTCATGTTAGCCAACTTGAGAAGTTGGCTCCAAGGCAAGGATGGTTCAGCAAAGGGAGCATAATAGTGATAACAACAAGGGATAAGCATTTGCTATCATCATATGGTGTATCTGATAGTGCTATATATCACATTGAATTCTTGAGTGATAGCGAGTCCCTTAAACTTTTCATTCAAAATGCTTTTAAAGAAGGGCAACCTAATGAAGATTATTTGAACCTTGCTAGAACCGTCATTGAATATGCTGGAGGCCTTCCTTTAGCACTCGAAGTGTTAGGTTCATTTCTTTGCAAAAGAACGATAGAGGAATGGGAAGATGCACTAGCTAAGTTCGAGAAATGTCTTCCAGAGGACATTTCCAAGATACTTGAAGTGAGTCTTCACGGATTAGAGCTTAATGAGAAGACTATATTCTTGGATATTGCTTGCTTTTTCAATGGGATGGACGAAGATCATATCATACAAATTTTAGAAACATTGGATAAGGATCTTCACCCAAAAATTGGAATAAGGCTTCTTATTGACAAATCACTAGTAATTAATTATGAAGGGCGTTTGTGGGTGCATGAAATTCTACAAAATATGGCTAAACATGTTGTCTATCAAGAATCATCTGGTGATGCCAGCAAGCTTTCTAGGATATTGTCCTTGGATGATGCCAATCATGTATTAGGAGGAAATAAGGGGACAGAAGCAACCCGGGGAATAATGCTAACGTTAAAAAAGTCATGTGATGCATTTTGGGATCCTGAAGCCTTCTCAAAACTGAGTAATCTCAAGTTACTTATCATTTCAAGTCACTCACACGTTTCACATTGCCAATTGAATCTTCCGCTTGGACTCAAGTCTCTTTCCAAAGAGTTGAAAGTCATAGAATGGGAGGGGTATCCATTATTTTATTTGCCAAGTCAACCTCAACTCAATCAGCTTGTTGTGCTAAAAATGCAGCATAGCAAGTTAAAAGAACTTTGGAGAGGAACACAGTCTCTTCGAAGCTTGAAGTCCATTGATCTATCTCATTCAGAATACCTCATCAAAACCCCAAATTTTGATGGAATTCCTCATCTTGAAAAGTTGATTCTTCAAGGGTGTTCTAACTTGGTTAAAATTTACCAGTCTCTTGGGCAACACAAGAAACTTGTCACTGTTGACTTGAAAGATTGCAAAGAAGTTAAAACGCTTCCAGAAAAATTTGAGATGAATAGCTTGGAGACTTTTATTCTATCAGGTTGTTCAAAAGTTAGAAAACTTCCTGAGTTTGGAAAAGATATGGCATGTCTATCAAAGCTTGATTTAGAGAAGACTGCTCTAGCCAAACTACCTCAATCGTTGGGTAATTTGATTGGTCTCGTTGAATTAAATTTGACAAACTGCAAAAAGCTGGTTTGTCTTCCATGTAGTGTTAGCAAGTTGAAAGCTCTGAAAGTTATCAAAATTTCTGAATGCTCAAAGCTTTCATGGCTGCCAGAGAATTTGAATGAAAATGAAGCTTTGGAAGAGCTAGAT 2664 0.3791 MGKMEVIFNARDLMTSSLLKKMSLYFQVWQQTLQLPNLSPSSSLSGELGDTFLEKFLGFIMALYNGNKQKFQILVMAPDADGVGCSSRSSGSTKRWKYDVFLSFRGEDTRKNFTDHLYAALKNEGLRTFRDEEGLERGESINPSLVEAIEESRSAIIVLSPNYASSTWCLDELQKILQLKEETSLQVFPIFYGVDPSDVRKQNGRFAEAFIRHEERFVKDKTQEWRDALKEVATLSGWDSKNRYETEFIESIADEIGSKLLDKSASDLGKLIGIEPKLDELNSIIARESEEVGFIGIWGAGGVGKTTLARAFYERERKRKSKNFEIHCFLDNIREACEKDGLISLQRKLLLSLYKRSIEVADFYEAMELIKRKLTDREILLVLDDVSHVSQLEKLAPRQGWFSKGSIIVITTRDKHLLSSYGVSDSAIYHIEFLSDSESLKLFIQNAFKEGQPNEDYLNLARTVIEYAGGLPLALEVLGSFLCKRTIEEWEDALAKFEKCLPEDISKILEVSLHGLELNEKTIFLDIACFFNGMDEDHIIQILETLDKDLHPKIGIRLLIDKSLVINYEGRLWVHEILQNMAKHVVYQESSGDASKLSRILSLDDANHVLGGNKGTEATRGIMLTLKKSCDAFWDPEAFSKLSNLKLLIISSHSHVSHCQLNLPLGLKSLSKELKVIEWEGYPLFYLPSQPQLNQLVVLKMQHSKLKELWRGTQSLRSLKSIDLSHSEYLIKTPNFDGIPHLEKLILQGCSNLVKIYQSLGQHKKLVTVDLKDCKEVKTLPEKFEMNSLETFILSGCSKVRKLPEFGKDMACLSKLDLEKTALAKLPQSLGNLIGLVELNLTNCKKLVCLPCSVSKLKALKVIKISECSKLSWLPENLNENEALEELD 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2056g00004 888 Gene3D - 90 259 IPR035897 -
Pral2056g00004 888 Gene3D - 433 517 IPR042197 -
Pral2056g00004 888 Pfam TIR domain 97 264 IPR000157 GO:0007165
Pral2056g00004 888 Pfam Leucine Rich Repeat 696 714 IPR011713 -
Pral2056g00004 888 SMART till_3 97 235 IPR000157 GO:0007165
Pral2056g00004 888 Gene3D Ribonuclease Inhibitor 785 888 IPR032675 -
Pral2056g00004 888 Gene3D Ribonuclease Inhibitor 632 784 IPR032675 -
Pral2056g00004 888 FunFam Disease resistance protein (TIR-NBS-LRR class) 94 262 - -
Pral2056g00004 888 Gene3D - 260 425 IPR027417 -
Pral2056g00004 888 ProSiteProfiles TIR domain profile. 96 260 IPR000157 GO:0007165
Pral2056g00004 888 SUPERFAMILY Toll/Interleukin receptor TIR domain 87 238 IPR035897 -
Pral2056g00004 888 Pfam NB-ARC domain 288 507 IPR002182 GO:0043531
Pral2056g00004 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 527 IPR027417 -
Pral2056g00004 888 SUPERFAMILY "Winged helix" DNA-binding domain 504 608 IPR036390 -
Pral2056g00004 888 SUPERFAMILY L domain-like 622 882 - -
Pral2056g00004 888 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 98 805 IPR044974 GO:0006952
Pral2056g00004 888 PRINTS Disease resistance protein signature 714 730 - -
Pral2056g00004 888 PRINTS Disease resistance protein signature 373 387 - -
Pral2056g00004 888 PRINTS Disease resistance protein signature 468 482 - -
Pral2056g00004 888 PRINTS Disease resistance protein signature 294 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2056g00004 Pral-Chr2056 32729 54741 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2056g00004 98 888 WRKY Transcription Factor Family AT4G12020 29.988 1.97e-91 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2056g00004 - - pcin:129318967 1015.37