Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2055g00006 ATGACAAGGGACGTCCTCATGAGCATTGCTGGTGATGATAAAGAATTTCAAGAATTGGCTCAGCGTCTGCAAGATGGTAAAAAAACCACCAAAGAGGGAGCTGCTGGTGACGGACATAATTTCCATGAGGATGATGAGTTAAAAAGTAATGGAACAGCTGAAGAAGTTAAAGTGGGACAAGATGGAATTGTGGAAGCTCCAGCCGTTCAGCATATGCCACAACAGCAACCTCAAGGGGCAATTTGGGAGAGGTTCCTACATCTCAGATCACTCAAGGTCTTGCTTGTGGAGATTGATGACTCTACTCGTCATGTTGTTGCGGCACTGCTTCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAACGGATTGCAAGCATGGAAGATCTTGGAAGATCTAACCAGTCAAATAGATCTTGTCTTGACTGAGGTAGCTATGCCTTGCTTATCAGGCATTGGCCTTCTGTCCAAAATTATGGGCCATAAAACGCGGAAAAACATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCGTTGACTTTCTAGTGAAACCTATTCGGAAGAATGAGCTTAAAAACCTATGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGTAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAATCAAAGAGTGTTGAGAAGTCTGATAACAACAGTGGCAGCAACGATGAAGAAGACAATGGTAGTGTGGGTCTTAATAACGGGGATGGAAGTGACAATGGTAGTGGTACTCAGAGCTCATGGACTAAACAAGCTATAGAAGTTGACAGTCCCAAACCATCCCAATGGGATCATATAACTGAGTGCCCTGATAGCACCTGTGCTCAAGTTGTTCTGTCAAATGCCAAAATTAGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCAGCTTGATCTGAAAGTGGACTCGAGTAGGGATCTGGGCTTGATTCTTGACTATAGAAATGAGGTCTTAGCCAACAATTTGGGCAAAAAACATAGCAACCGACTTGATACAGGCTCCTCTAAATTCAATGAGCAGCTTAATAGGGGACAGCTGGAACTTCACTGTGAAGATCCTTCTAGCAAGTTAAGATGCAAAGGTCCATGTCAGTCTGATGCTGTTACCAGTTATGATTTGCGGATTCATGGTGGAGAATTCGGAGCCTCAAATAGAAGAGCCAAGTCCTCAGATACTGAAAGCAAAGCTATCAATGATAATGAAGAATTACCATCTCTTGAGCTCAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGGATTACAATTCAGGATGAGCGTAATGTTTTAAGACGTTCAGACCTTTCGGCCTTTTCAAGGTATAATGCGGCTTCTAATGCTAAGAAATCTCCTGGTGGTTGTGCTGGAAGCAATTCTCCGCATAACAATAGCTTAGAAGTTACAAAGAAAGATTCATCACGTGACATTCAATCCCATTCTAGCGGAAACCCCCCTAACCAGAACTCGAATGGTGCCAGCAATAACATTGACATGGGATCCACAACTGATAACGCTTTCACTAAATCTGCTGTTATGAGCAAGACAACAGTGGCATCTCCAAGTAAATGTTTGTACCAATCTTCTGCCTTCCAGCCTATAAGAAACAACTTGATGTGTACGTCACAACAAGTTGCAGTACATAATAATGGAGATACGACAGCCTCAACTATGCTAGAACCACCTAGAGGAGGTGTACACAAGGACTCTTCAACGCAGGACTTCCATGGGATATACAAGAACCATAGCTGCATCGTGAACAACATGCAGCATCAACTACCTCCGGACCATGATGATGCATCATCAAAGAAACTTACTGGCACAGCACCCCACTGCGGGTCATCAAATGTAGTCGAAATGGTTGAAGGTAATGTTGGAAATTATAGTATCAATAGAAGTGTCTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGTACTGCAGTCAATGCTGGAGGGATAAACATAGAGAATAACAATGGAATTGCTGGGAATAGTCGAGATGGTGATGCTAGTGGGAGTGGAAGTGGGAGTGGAGGTGGAAGTGCTAACAGGATGGATCAGAAGAAGACTTCGCAAAGAGAAGCAGCCTTGACTAAATTTCGGCAGAAGAGAAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGTAGAAAGAAATTAGCGGAACAGCGGCCTCGCTTTCGTGGACAATTTGTTCGACAGGCCTCCTACAAAAGTACAAGTGAGGCAGAAGAGCCAACTGACAGCTGA 2352 0.432 MTRDVLMSIAGDDKEFQELAQRLQDGKKTTKEGAAGDGHNFHEDDELKSNGTAEEVKVGQDGIVEAPAVQHMPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLRNCSYEVIEAANGLQAWKILEDLTSQIDLVLTEVAMPCLSGIGLLSKIMGHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSVEKSDNNSGSNDEEDNGSVGLNNGDGSDNGSGTQSSWTKQAIEVDSPKPSQWDHITECPDSTCAQVVLSNAKISGNKMFSVAIKECPDQKDQLDLKVDSSRDLGLILDYRNEVLANNLGKKHSNRLDTGSSKFNEQLNRGQLELHCEDPSSKLRCKGPCQSDAVTSYDLRIHGGEFGASNRRAKSSDTESKAINDNEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKSPGGCAGSNSPHNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTDNAFTKSAVMSKTTVASPSKCLYQSSAFQPIRNNLMCTSQQVAVHNNGDTTASTMLEPPRGGVHKDSSTQDFHGIYKNHSCIVNNMQHQLPPDHDDASSKKLTGTAPHCGSSNVVEMVEGNVGNYSINRSVSGSNNGSNGQNGSSTAVNAGGINIENNNGIAGNSRDGDASGSGSGSGGGSANRMDQKKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQASYKSTSEAEEPTDS 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2055g00006 783 Gene3D - 90 245 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 215 271 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 477 497 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 662 719 - -
Pral2055g00006 783 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
Pral2055g00006 783 MobiDBLite consensus disorder prediction 215 232 - -
Pral2055g00006 783 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Pral2055g00006 783 Pfam CCT motif 726 768 IPR010402 GO:0005515
Pral2055g00006 783 SUPERFAMILY CheY-like 89 215 IPR011006 -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 625 645 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 720 735 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 508 532 - -
Pral2055g00006 783 CDD psREC_PRR 93 196 - -
Pral2055g00006 783 SMART REC_2 91 206 IPR001789 GO:0000160
Pral2055g00006 783 MobiDBLite consensus disorder prediction 21 49 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 736 751 - -
Pral2055g00006 783 ProSiteProfiles CCT domain profile. 726 768 IPR010402 GO:0005515
Pral2055g00006 783 FunFam Two-component response regulator-like PRR37 91 249 - -
Pral2055g00006 783 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 289 IPR045279 GO:0009736
Pral2055g00006 783 MobiDBLite consensus disorder prediction 246 271 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 662 783 - -
Pral2055g00006 783 MobiDBLite consensus disorder prediction 477 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2055g00006 Pral-Chr2055 7797 16234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2055g00006 167 770 Response Regulator Gene Family AT5G02810 48.243 3.74e-124 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral2055g00006 Response_reg 4.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2055g00006 K12129 - gmx:100796933 991.104