Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2051g00007 ATGAGTTATTGGTCACCAGCATCTGTTTTTAGTAATCACCCCATTCCGTTGTCTCCTGCAAGCACCATATCTTATGTTACCATCATAAGTGGCACTGGTTTTATGTGTAGTCGAAGCCAAGGAAGGTGCTATCTCTCTGTTTCTGATAACCATTGTAAAATCAGGAGACTCGGGATTTCTGGGGTACTTAAATCTAGACAAGGATTGACAGATTTTCAGGCGCAACAAGGAACTTGGGAAGAACCTGATGATGGTAGCGGCAGTGAGTATGATGAAGAAGAAGATGAGCAAACAGAAGACGAGAACTATGGCTTTGAAAGTGATTGGGAAGAGGAAGAGATAACGTCGTCAGCTGTTAATGGTGTTAGTTCAGTGGACAACTGTGAGGAGGATTTTAAAAAAGAGGTTGAACAGCTTTTAGAGCCTGAAGAAAGAGCAGTCTTGCAACAGAATGTGACTCCAAACTTGGAAAAAATTTCAACAGAAAAATGGAGCCCAATGCACACTCTAGCGCTATCAACACAGATAAAATGTATGGATCAACTGCTTGAGAATGGTGTTGGTATTGATCTTAAGAATAAGGAAGGTCTCACTGCACTTCATATAGCTATCATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACGGAAAGGTGCAAGTCCTCATGTCAAGGACAAGGATGGTGCTACCCCTCTTCATTATGCAGTTCAAGTTGGTGCCAAGCAAACTGTAAAGTTATTGATCAAATATAAGGTTGACGTCAACGTTGCAGATAATGAAGGTTGGACTCCGTTGCACGTTGCTATCCAAAGCAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAATGGTGCGGATAAGACACGGAGAAACAAGGATGGGAAAACAGCATTGGATCTAAGTTTATGTTACGGGAAGGACTTCAAGTCTTATGACCTTGGCAAATTATTGAAGGTAGTTCCAGCTGACACTGATTTTTGA 984 0.4075 MSYWSPASVFSNHPIPLSPASTISYVTIISGTGFMCSRSQGRCYLSVSDNHCKIRRLGISGVLKSRQGLTDFQAQQGTWEEPDDGSGSEYDEEEDEQTEDENYGFESDWEEEEITSSAVNGVSSVDNCEEDFKKEVEQLLEPEERAVLQQNVTPNLEKISTEKWSPMHTLALSTQIKCMDQLLENGVGIDLKNKEGLTALHIAIIGKKEAVISHLLRKGASPHVKDKDGATPLHYAVQVGAKQTVKLLIKYKVDVNVADNEGWTPLHVAIQSRNRDIAKILLVNGADKTRRNKDGKTALDLSLCYGKDFKSYDLGKLLKVVPADTDF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2051g00007 327 ProSiteProfiles Ankyrin repeat region circular profile. 261 287 - -
Pral2051g00007 327 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Pral2051g00007 327 ProSiteProfiles Ankyrin repeat region circular profile. 228 260 - -
Pral2051g00007 327 ProSiteProfiles Ankyrin repeat region circular profile. 195 227 - -
Pral2051g00007 327 MobiDBLite consensus disorder prediction 72 110 - -
Pral2051g00007 327 Gene3D - 123 229 IPR036770 -
Pral2051g00007 327 ProSiteProfiles Ankyrin repeat profile. 228 260 IPR002110 GO:0005515
Pral2051g00007 327 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 89 319 - -
Pral2051g00007 327 SUPERFAMILY Ankyrin repeat 154 306 IPR036770 -
Pral2051g00007 327 Gene3D - 230 308 IPR036770 -
Pral2051g00007 327 SMART ANK_2a 195 224 IPR002110 GO:0005515
Pral2051g00007 327 SMART ANK_2a 228 257 IPR002110 GO:0005515
Pral2051g00007 327 SMART ANK_2a 261 290 IPR002110 GO:0005515
Pral2051g00007 327 SMART ANK_2a 162 191 IPR002110 GO:0005515
Pral2051g00007 327 ProSiteProfiles Ankyrin repeat profile. 261 293 IPR002110 GO:0005515
Pral2051g00007 327 MobiDBLite consensus disorder prediction 84 110 - -
Pral2051g00007 327 Pfam Ankyrin repeats (3 copies) 210 292 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2051g00007 Pral-Chr2051 48837 52409 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2051g00007 179 287 Ion Channels AT2G25600 30.714 1.51e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2051g00007 - - lja:Lj0g3v0067589.2 400.979