Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2043g00001 ATGGCTGTCCCTCAAACTCCAACCACATCTCCAAATCTGTATCCACAAGAACTTCAGTTAAAACTATATCAGGCCTTCATTTTCTCAATTCCAATCCTATTTTCCATCATTCTCTTTCTCTTGTTTTATTTGTTCTACCTCAAGCGCAGAGCTTCCTCTCTCTCTTCCCCTCCTCACTTTCTTCCTACCACTGCTCCTTCAACTACCTATCATTCCACCCCTTGTCGCTTGGATCTGACGCTTCAGTTCCTCGACACTCTTCCAAAAGTTTTATTTGATGAAGAATTGAAAGAAAAAGATTCACAATGTTGTGTGTGTCTGGGAGAATTTGAGATGAAAGAAGACGTATTACAGATCCCTCAGTGCAAGCATGTGTTTCACAGAGATTGCATTTACCATTGGCTCCATTCACACTCCACTTGCCCACTGTGCAGATGTTGTATCATTCCTCCCACCAAGTTTCTGAATCCACCACCCCTTCCTCCACCTCCTCCTCTTGCGGACGAAGCTGCTTCTGCTTCTGCTTCTTCCAACTAA 537 0.4376 MAVPQTPTTSPNLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPPHFLPTTAPSTTYHSTPCRLDLTLQFLDTLPKVLFDEELKEKDSQCCVCLGEFEMKEDVLQIPQCKHVFHRDCIYHWLHSHSTCPLCRCCIIPPTKFLNPPPLPPPPPLADEAASASASSN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2043g00001 178 MobiDBLite consensus disorder prediction 158 178 - -
Pral2043g00001 178 SUPERFAMILY RING/U-box 81 156 - -
Pral2043g00001 178 Pfam Ring finger domain 102 145 IPR001841 -
Pral2043g00001 178 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Pral2043g00001 178 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 12 155 - -
Pral2043g00001 178 SMART ring_2 103 144 IPR001841 -
Pral2043g00001 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 150 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2043g00001 Pral-Chr2043 6685 8965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2043g00001 8 150 C3H Transcription Factor Family AT4G10150 42.466 4.09e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2043g00001 K19039 - gmx:100794298 210.305