Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2040g00010 ATGCGGCCTCCGATCAAGAAAACCAGCTATGGCAGAGGGCAGGGCGTGGAGGTCTCTGTCAAGGAAGAAGGATTTCATGGATCCTACTTCGAAGCGAAGGTGGTTTCTTACCTCGACAATGGGCTCTACATCGTCCAGTACCAGACCTTGCTGGAAGACGACGAGTCCAAATTTCTGACTGAGACTGTGTACCCTAAGGAGCTTCGTCCTCTGCCTCCGGCCATCCCTGTTCGCCGGTTCTCCGTTAAGCAGAAGGTCGATGTGTTCGACAAGGACGGGTGGTGGGTCGGCGTTATCACCCGAAAAGATGGCCCCGACGGTTATTTTGTGTATTTCTGGACCACGGACGAGGAGATCGCTTACCCTTCCTCTCTGCTTCGGGTTCATCAGGATTGGATCAACGGCAAGTGGGTTTTGCCCAAGAAAGCTCGCTCTTAG 438 0.5365 MRPPIKKTSYGRGQGVEVSVKEEGFHGSYFEAKVVSYLDNGLYIVQYQTLLEDDESKFLTETVYPKELRPLPPAIPVRRFSVKQKVDVFDKDGWWVGVITRKDGPDGYFVYFWTTDEEIAYPSSLLRVHQDWINGKWVLPKKARS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2040g00010 145 CDD Tudor_Agenet_AtDUF_rpt1_3 16 73 - -
Pral2040g00010 145 Gene3D - 2 81 - -
Pral2040g00010 145 CDD Tudor_Agenet_AtDUF_rpt2_4 84 128 - -
Pral2040g00010 145 SMART agenet_At_2 8 76 IPR014002 -
Pral2040g00010 145 SMART agenet_At_2 78 134 IPR014002 -
Pral2040g00010 145 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 142 - -
Pral2040g00010 145 Pfam Agenet domain 13 73 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2040g00010 Pral-Chr2040 32198 32635 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2040g00010 22 132 PHD Transcription Factor Family AT5G58610 30.303 4.48e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2040g00010 - - vra:106753183 174.866