Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2040g00008 ATGGGATTCACTCATCTTTCTCCTTCTTCTTCTCAATCCATGCCTCTCACCAGAACCGACAATTTCTCCGTTGGCCAAGCCGTCGAAGTCACCAACAACCCTCCAGGCTCTTACTTTGAAGCCACCGTAATCTCGCGCCTCTCCAATGGTTCCTATGTCGTCGAGTACGACACACTGGTAAACGACGACGGCGACGACGTTCGTGATGACAGTTTCTTCACCGAGACGGTTTACCCTGACGACCTTCGTCCCCGGCCGCCACCCGTCGATGTTCCAGCCGCCGGGTTTTCTCTGAACCAAAAGGTGGATGCCTACGAAAACGAGGCCTGGTGGGCCACTACCGTCACCGGAAGAAGGGACTCAAATTATTATTTTGTTCGCTGTGTCGCCGGAGACAGTGACGTTATGGTTCATTCCTCTCAGCTTCGGGTTCATCAGGACTGGATCGGGGGACGATGGGTTTTGCCCTAG 471 0.5393 MGFTHLSPSSSQSMPLTRTDNFSVGQAVEVTNNPPGSYFEATVISRLSNGSYVVEYDTLVNDDGDDVRDDSFFTETVYPDDLRPRPPPVDVPAAGFSLNQKVDAYENEAWWATTVTGRRDSNYYFVRCVAGDSDVMVHSSQLRVHQDWIGGRWVLP 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2040g00008 156 Pfam Agenet domain 25 87 IPR008395 -
Pral2040g00008 156 CDD Tudor_SF 25 57 - -
Pral2040g00008 156 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 16 155 - -
Pral2040g00008 156 SMART agenet_At_2 94 150 IPR014002 -
Pral2040g00008 156 SMART agenet_At_2 20 90 IPR014002 -
Pral2040g00008 156 Gene3D - 8 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2040g00008 Pral-Chr2040 23083 23553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2040g00008 36 148 PHD Transcription Factor Family AT5G58610 26.923 9.60e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2040g00008 - - pcin:129313269 160.614