Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2034g00005 ATGGCCAACTATGGCAGTTCAATAGGGGACGTCCCAAGGTTCTGTCTCCGAGATTTTGATTTCACTTCCTTTTGCACTCAAAGGAGCATCATAGACACCGTGAATCTTTTCTTTCTCTGTGCCTTTTACATATCCTTGCTTTGCAATTTTATCAGAAAAAACAATACAAGTGACAGCCCCAGAAAAGGATGGGTTTGTTCGGTAGTCTCAGTCTGTTGTGCTCTCATAAGCATTGCATATTTCGGTAATGGTCTGTGGTGTCTTATTGCCAAATCTGAAGACTTTGGGAAGCTGAGGTGGTTGGTTTATTTTTTCAGAGGAGTGGTCTGGATTTCTCTAACAGGATCTTTACTTGTTCAGAGATCTAAATGTGTAAAAATTCTAAACCTTGTTTGGTGGGTCTCTTCATGCACACTTGTTTCAGCTCTCAATATTGAGATTCTGCTAAAAGAGCATGACATTCAAATACTTGATCTGGTCCAATGGCCTGTGCATTTTTCACTTGTTTTATGTGCCTTCCAAAGCCTTTATTCTGCACCTCAAAGCACTCAAACTACCACTATGTCAGAGCCTCTTTTAGCTCAAAAGGATGAAAATAAAGAATCAAAACTTGCACGTGCCAATTTTTTCAGCAAATTGACTTTCTCATGGATCAATTCCCTACTGAATTTGGGCTATTCAAAGCCATTAGCTCTTGAAGACATCCCATCTCTTGTTTCTGAAGATGAAGCTGCTTTAGCCTACGAAAAGTTTTCTCATGGGTGGGATTTTTTCACAATGGATAGGAGCAAAAGAGATAGTAACAAAAACTGGGTTATGTGGTCCATATCAAGAGTTTACTTGAAAGAGAATTTTCTCATAGCAATCCTGGCATTACTCAGGACATTTTCTGTAGTAGTTTCTCCTTTGTTGCTTTATGCTTTTGTGAACTATTCAAAATCTAAGGAGGAAAATCTGAGGGAGGGTCTTGCCATAGTAGGTTGCCTGATCATTTGCAAGGTAATTGAATCTCTGTCACAGAGGCACTGGTTTTTTCAATCACGAAGGTCGGGAATGAGAATGAGATCAGCTCTAATGGTGGCAGTATATAACAAGCAACTGAAAGTTTCAAGCGTAGCCAGAAGAAGACACTCAACTGGGGAAATCGTAAATTACATAGCAATTGATGCTTATAGGATGGGAGAATTTCCATGGTGGTTTCACACGACATGGACATTAGCATTACAACTTTTTCTGTCCATTGGAGTCCTATTTGGCGTTGTTGGTCTTGGTGCTCTTCCTGGTTTAGTCCCTCTTCTCATATGTGGCTTTCTTAACATACCCTTTGCAAAGATCATTCAAAAGTGTCAATCCGAATTTATGGTTGCACAGGATGAACGTCTAAGGTCAACTTCAGAGATCCTAAATAATATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAAGACCTTGGTAGAAAGCCTTCGTGCCAACGAGTTCAAGTGGCTGGCTAAGGCACAGATCATAAAAGCTCATGGTTCATTCGTATATTGGATGTCTCCAACGATTGTCTCCTCGGTGATCTTCCTAGGATGTGCTCTTTTGCAAAGCTCCCGTTTAAATGTTGGATCCATATTTACTATTCTTGCTACTTTGAGGGCCATGGGTGAACCTGTTAGAACGATTCCAGAGGCTCTTTCTGTTCTAATCCAAGTTAAGGTCTCCTTTGATCGCCTCAACACCTTTTTGCTTGATGATGAGCTAAGTGATGATGCCATTGGAAGAAACTTAATGCAAAATTCAGTTAATACCGTGGAAATTCAAGCAGGTAACTTCAGTTGGGATCCGGAATCGATGTCTCCAACTTTGAGAGATTTGAATATGGAAATCAAATGGGGGCAGAAAATTGCAGTTTGCGGACCAGTTGGAGGTGGAAAATCATCATTGATATATGCAATTCTCGGCGAGATACCCAAAATTTCAGGAACTGTTAACGTGGGTGGAACAGTTGCCTATGTTTCTCAAACATCTTGGATCCAAAGTGGGACAGTTCGTGATAATATACTCTTCGGCCAAGCGATGGACAATACCAAATATGAGAATGCCATAAAAGTCTGTGCCTTGGATAAGGATATTAATGCTCTTAGCCATGGCGATCTTACAGAAATAGGTCAGCGAGGGATCAACTTGAGTGGAGGACAAAAACAAAGGATTCAACTGGCTCGCGCCGTATATAATGATGCTGATATTTATCTCTTAGATGACCCTTTCAGTGCAGTAGATGCACACACTGCTTCTACCCTTTTCAACGATTGTGTCTTGAACACTCTAAAGGAGAAAACCGTAATTCTGGTGACTCATCAAGTGGAGTTTCTCTCAAAAGTTGACAAAATCCTTGTAATGGAGGGTGGAGTAGTTACCCAGTCAGGATGTTATGAAGATCTTCTAACAGAAGGGAAAGCCTTTGAACAACTTGTAAATGCCCACAGAAAAGCAATATTAGGCTCAGATCAAAACCATGAGACCCCGGGAGAATATGAAGATGTAATAAACGTTCTTCAGCCACTGGAGTCTCGTGGATTTGATCTCTCTAAGGATCATAAGAATGAGCAGGTTTCTAGCAAAGATCAAGTGTTACAACTTACGCGAGAAGAAGAAAAGGAGATTGGAGATGTTGGGTGGAAGCCATTCTTGGATTATCTTTATCTCTCCAAAGGATCATTGCTTATGTGTCTGATCATTTTAGCACAGGTGGCTTTTATTGGTTTGCAAGCAGCATCAACCTTTTGGCTTGCTCTGGCCATTGAAGTACCAAAAGTAACAAATGGCATCTTGATTGGGGTTTACACATTAATCTCACTTCTAAGTGTTGGCTTTGTGTGGCTAAGATCTATCATGGGGGCCCACCTTGGATTAAAAGCTTCTGCTTGTTTCTTCTCTGGTTTCAATAATGCTATCTTCAAGGCTCCTATGCTGTTCTTTGACTCAACCCCAGTAGGAAGAATTTTGACCCGAGCTTCGTCAGATTTGAGTACGTTAGACTTTGATATACCTTATGGACTCACCTTTTCAGCAAGTGGTGCAATAGAACTTCTGACAATAATTGCAATAATGGTTTCAGTCACGTGGCAAGTACTTATTGTTGCAGTTCCCGCCTTAATAACTTCCAAATACATTCAGGGCTATTACCAAGCCTCTGCTAGGGAACTAATGAGAATCAATGGAACCACCAAAGCACCGGTTATGAATTTCACCGCGGAGACATCATTAGGAGTGGTGACTGTGAGAGCTTTCAACATGGCAGATAGATTTTACCAAAATTACCTCAAGCTTGTGGACACAGATGCAAAACTATTCTTTCATTCTAATGTGGCCACAGAATGGTTAATTTTAAGGATTGAAATACTTCAGAACTTGACACTCTTCACAGCAGCTTTGCTGCTTGTTCTACTTCCAAAGGGACTTATGCATCCAGGCCTTGCAGGACTCTCTCTATCATATGCTTTGTCATTGACAATATGCGTAACTTTTATGAGTCGTTGGTTCTGCAACTTATCAAATTATATTGTTTCCGTTGAAAGAATCAAACAGTTCATTCACATACCAGAAGACCCTCCTGCAGTTGTGGAGAACAGAAAACCTCCACCTTCATGGCCCTCCAAGGGTAGGATTGAGCTTCAAGACCTTGAGATAAGGTATCGTCCAAATGCTCCATTAGTCCTTAAGGGAATCACTTGTGCATTCAAAGAAGGGAGTAGAGTGGGAATTGTAGGGAGGACTGGAAGTGGGAAAAGTACACTAGTAAGTGCTTTGTTTCGATTGGTTGATCCTGCAAGAGGTGATATTCTTATAGATGGGATCAGCATATTACCAATGGGGTTGAAGGATTTGAGGATGAAGCTGAGCATTATTCCTCAAGAACCCACTCTTTTTAGGGGTAGCATTAGAACCAACTTGGATCCTCTTGGCCTCTACTCTGACAATGAAATCTGGGAGGCTTTAGAGAAATGCCAGCTCAAGTCAACAATCAGCAGGCTACCAAATCAACTGGACTCTTCTGAAATAGTTTGA 4056 0.4098 MANYGSSIGDVPRFCLRDFDFTSFCTQRSIIDTVNLFFLCAFYISLLCNFIRKNNTSDSPRKGWVCSVVSVCCALISIAYFGNGLWCLIAKSEDFGKLRWLVYFFRGVVWISLTGSLLVQRSKCVKILNLVWWVSSCTLVSALNIEILLKEHDIQILDLVQWPVHFSLVLCAFQSLYSAPQSTQTTTMSEPLLAQKDENKESKLARANFFSKLTFSWINSLLNLGYSKPLALEDIPSLVSEDEAALAYEKFSHGWDFFTMDRSKRDSNKNWVMWSISRVYLKENFLIAILALLRTFSVVVSPLLLYAFVNYSKSKEENLREGLAIVGCLIICKVIESLSQRHWFFQSRRSGMRMRSALMVAVYNKQLKVSSVARRRHSTGEIVNYIAIDAYRMGEFPWWFHTTWTLALQLFLSIGVLFGVVGLGALPGLVPLLICGFLNIPFAKIIQKCQSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFKTLVESLRANEFKWLAKAQIIKAHGSFVYWMSPTIVSSVIFLGCALLQSSRLNVGSIFTILATLRAMGEPVRTIPEALSVLIQVKVSFDRLNTFLLDDELSDDAIGRNLMQNSVNTVEIQAGNFSWDPESMSPTLRDLNMEIKWGQKIAVCGPVGGGKSSLIYAILGEIPKISGTVNVGGTVAYVSQTSWIQSGTVRDNILFGQAMDNTKYENAIKVCALDKDINALSHGDLTEIGQRGINLSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTASTLFNDCVLNTLKEKTVILVTHQVEFLSKVDKILVMEGGVVTQSGCYEDLLTEGKAFEQLVNAHRKAILGSDQNHETPGEYEDVINVLQPLESRGFDLSKDHKNEQVSSKDQVLQLTREEEKEIGDVGWKPFLDYLYLSKGSLLMCLIILAQVAFIGLQAASTFWLALAIEVPKVTNGILIGVYTLISLLSVGFVWLRSIMGAHLGLKASACFFSGFNNAIFKAPMLFFDSTPVGRILTRASSDLSTLDFDIPYGLTFSASGAIELLTIIAIMVSVTWQVLIVAVPALITSKYIQGYYQASARELMRINGTTKAPVMNFTAETSLGVVTVRAFNMADRFYQNYLKLVDTDAKLFFHSNVATEWLILRIEILQNLTLFTAALLLVLLPKGLMHPGLAGLSLSYALSLTICVTFMSRWFCNLSNYIVSVERIKQFIHIPEDPPAVVENRKPPPSWPSKGRIELQDLEIRYRPNAPLVLKGITCAFKEGSRVGIVGRTGSGKSTLVSALFRLVDPARGDILIDGISILPMGLKDLRMKLSIIPQEPTLFRGSIRTNLDPLGLYSDNEIWEALEKCQLKSTISRLPNQLDSSEIV 1351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2034g00005 1351 Pfam ABC transporter transmembrane region 906 1163 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2034g00005 1351 Pfam ABC transporter transmembrane region 286 547 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2034g00005 1351 Gene3D - 1202 1349 IPR027417 -
Pral2034g00005 1351 Gene3D - 584 840 IPR027417 -
Pral2034g00005 1351 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 566 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2034g00005 1351 Gene3D ABC transporter type 1, transmembrane domain 868 1199 IPR036640 GO:0005524|GO:0016020
Pral2034g00005 1351 CDD ABCC_MRP_domain1 600 799 - -
Pral2034g00005 1351 FunFam ATP-dependent bile acid permease, putative 1204 1349 - -
Pral2034g00005 1351 SUPERFAMILY ABC transporter transmembrane region 892 1201 IPR036640 GO:0005524|GO:0016020
Pral2034g00005 1351 FunFam ABC transporter C family member 5 868 1200 - -
Pral2034g00005 1351 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Pral2034g00005 1351 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 205 1336 - -
Pral2034g00005 1351 FunFam ABC transporter C family member 10 268 582 - -
Pral2034g00005 1351 Pfam ABC transporter 618 752 IPR003439 GO:0005524
Pral2034g00005 1351 SUPERFAMILY ABC transporter transmembrane region 273 580 IPR036640 GO:0005524|GO:0016020
Pral2034g00005 1351 FunFam Multidrug resistance protein associated1 579 843 - -
Pral2034g00005 1351 SMART AAA_5 1245 1331 IPR003593 GO:0016887
Pral2034g00005 1351 SMART AAA_5 627 800 IPR003593 GO:0016887
Pral2034g00005 1351 Pfam ABC transporter 1236 1340 IPR003439 GO:0005524
Pral2034g00005 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1208 1346 IPR027417 -
Pral2034g00005 1351 CDD ABC_6TM_ABCC_D2 901 1194 IPR044726 GO:0140359
Pral2034g00005 1351 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral2034g00005 1351 ProSitePatterns ABC transporters family signature. 725 739 IPR017871 GO:0005524|GO:0016887
Pral2034g00005 1351 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 823 IPR003439 GO:0005524
Pral2034g00005 1351 Gene3D ABC transporter type 1, transmembrane domain 259 583 IPR036640 GO:0005524|GO:0016020
Pral2034g00005 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 597 823 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2034g00005 Pral-Chr2034 48060 54424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2034g00005 600 873 Calmodulin-binding Proteins AT2G36910 25.552 8.53e-23 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2034g00005 - - qsa:O6P43_018290 1877.06