Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2029g00003 ATGTTCCTTAGTGAGAGATGTGTACATTTTTCATCATCGCGTTCATTTCTGTATCAATCTCAATTGATCACACTTAGACCGCAGACTCATTTAGATTCGGGGATAATAGATATCTTTGCTGATATATTGACCGACATCGAAAGAAGAAAGGGAAGTAAGCCTTTGAATTGGTATCTTCCAGTGATGTTTTCGAATGCAGCACTTAATAGTGGTGATGGAAGTTACTTCCCTGACTTTGTCGAACGGCATAATATGAGAGACAACTACATGTCAGACTTGATATATTGTGAGAAGATATTTATTCCAGTTCATGTTGAAAAAAATTCATGTGGACATTATTATCTATATATTATTTATATGAAGAATCAAGAAGTTGAAATATGGGATTCGCTGTGTGACCAATTCATAGATAAAGCTGAACGTGACCAAACAACAGAGAAACTGTTGCTTGCTATGGATAGACTCTTTGAAAATGGTACGTTCACAAAATTTTACTGGAGAATGAGAAGCAATATACAATTACAGCCTAATGGATATGATTGTGGTATATTTGTTATTAATTACATGCAACAACTGAGAAATTATGTGAGGAAAAAGCCTTCAGTACAGTTTGACAGCCATGAAGAAAGATTGAATTTGGCATTAAAGTTACTCAAGAGTGACTTGAACCAAGAAAAAGAAACGCTATACGATGAAGCAGCGAGATGGCACCAGGCACAGGTTGAAAGTGAAAAAGAAAATTCATGCGGAATTAAAAGAAAGGGGGTTCATTTCGATACTGAAGCCAAGAAAAGTAACGTTGGTTTGAAAACAGAATGCATTAAAGGTTATAAACTGCCAACAACTCATCTAGTGGGAAAAGAAGTTCAAAGACATACTCAACAAATATGGGAATGGGTTATGAAAGATGAGGTGTCAGTAATTGGGATATGGGGAATGGGAGGGGCAGGAAAAACAAGTTTAGCAACTCATGTCCATAACAAGCTTTTAGAAGACACTGGTGATGACTTTGACCATGTTATTTGGATTACCATGTCACAAGATGATAATAGAATTTATAAGTTGCAAAAGGCCATTGCAAGATCAATTAATGTTGACATATCTGATGAGTGTGATATCACAAGAATATCTGGAATATTGTTGCAGGCATTCGAATACATAAATAGATGTGTTCTTATTCTAGATAATGTTTGGGAACCTATCATTTTAGAAGAGGTTGGATTTCCTGTTTCAAACAAAGTAATTAAATTGATTCTGACAACTCGTTCGTGGGAAGTGTGTCAAAGTATGAATTGCATGAAGAACATAATAAATGTAAAACCTCTAGATGAAGAAGATGGTTGGGATTTGTTTAAAAGCACTGTTAGGATCCATCAAATACAACCTCGTGGGTTCGAGCGTATAGCAAGGGACGTGGCAGATCAATGCGGTGGTTTACCTCTTGCTATTGTTACAATGGCAAGAAGTATGAAGGGAAAGGAACACATAAGAGAGTGGAATTATTTGTTGGAATGCCTTCAAAACTTGGACAACAGACAATATGATATGGAGGAGAGGGTATTTTCAGTATTGAAATTTAGCTATGTTTGCTTAAATAATAAATTGCAAAGGTTTCTTTTGTACTATGCATTAAGTGCCAAGGAATATGTTGAAGATACTTATGTTGAGAAATATGTTGAAGATAATTATACTGAATGTTTAATCAGAAAATTTTTCTATGAGGGATGGACAAGCGATGAAACAAAGAGCATAGAGATGCAATATAATGAAGGTTACACCATGTTGAATAAATTAAACAATAATAGTTTGTTGATGAAAGAAAATAGATATTGGAGAATGCATACTTTGTTGAGGGTCATGGCTATTGATTTTGCAAAGAAGGCTGGTGAAATCATGGCAAAACCTTGTATGAAGTTGGTAGAAGTACCAAAGAACGGAGAATGGAAAGAAAATTTGGAGAAAGTTTTTCTGACTGGAAACAAAATACAGAAAATTTTGGATGGCACATCTCCTAAGTGCTCTAAACTTTCCACATTGCTTTTAGATTGTAATTATGATCTTGAGTCCATCCCAAATGATTTTTTCAGCAACATGCCAGCTCTTAAAATACTTGATCTATCTAAGACTGGCATCAGACAATTGCCTGAATCTGTATCTAACTTGGAATGCCTCACTGCATTATTGCTTTCACGGTGTGAAGAATTGATTTATGTGCCTTCATTAGCAAAATTGCAACGATTAATAGAGTTGGACCTTTCATTTACAGCCATCAATGAAACACCTTGTGGTTTGGAATTGTTGGTCAATCTTTTAAGGTTGAATCTAGAAGGTACAACTCAGTTGAAAATGTCAACATCAGTAATATCCAAAATGACCAATCTTAGGTCTCTTAGGTTGATGAATAGTAATCCAAGATCAATGGATGCTAGCGCACAGGATCTACAGGGTTTGGAAAAGTTGGAAGTTATTTCAGTCAACTTTTGTAACACTGAAGAGTTTAATGCCTATGTTAAGAGCTTCAAAGGCAAAGATCATGTACTCAAAAATTATTTTCTAAGTTCAGCTACATTATTTGATTCTGCTTCTCATGCGTGTGCACTTGAATCCTATTCCTTAAAAAGGGTTGTTTTATCTGGTATTGATTTGGAAAACAGAGCAACAGTACTTCCGGAGGACATCAATGAGTTGTTCATAAGTAAATGTGAGTTGAAAGACTTGAAACAAATAGTGGCACCATTCGCTCCATCCTTAGATAGCCCATATCATTACCTTAGAGATCTTGATGTTTTTGAGTGCAGCGAAATGAAGATTCTGATGATGCTGGACTTATTAGCACAGCTCCAAAACCTAGAGACCATTTCTGTTGGATTTTGTGACTCGATGGAAGAAATAGTTGGAAACCATTATTGTAGTGGTAACACTTTTAACCCTACTATCACTCTTCCCAAAGTGAGATCTGTGAAATTGTATTGTCTACCAGAATTAACCTTTGTATTTAAAGGAACTATGCTTTGTCCTTCACTCAAATATTTCCATGCCTACATTTGTGAGAAATTGAGCCCCCCTCATATCGAGATCGTAGAAGGACTTAAGCTTCAGATGGAAAATATCTCCATTGGAGGATATTGTTGGAATTATGGTAATTAG 3147 0.3565 MFLSERCVHFSSSRSFLYQSQLITLRPQTHLDSGIIDIFADILTDIERRKGSKPLNWYLPVMFSNAALNSGDGSYFPDFVERHNMRDNYMSDLIYCEKIFIPVHVEKNSCGHYYLYIIYMKNQEVEIWDSLCDQFIDKAERDQTTEKLLLAMDRLFENGTFTKFYWRMRSNIQLQPNGYDCGIFVINYMQQLRNYVRKKPSVQFDSHEERLNLALKLLKSDLNQEKETLYDEAARWHQAQVESEKENSCGIKRKGVHFDTEAKKSNVGLKTECIKGYKLPTTHLVGKEVQRHTQQIWEWVMKDEVSVIGIWGMGGAGKTSLATHVHNKLLEDTGDDFDHVIWITMSQDDNRIYKLQKAIARSINVDISDECDITRISGILLQAFEYINRCVLILDNVWEPIILEEVGFPVSNKVIKLILTTRSWEVCQSMNCMKNIINVKPLDEEDGWDLFKSTVRIHQIQPRGFERIARDVADQCGGLPLAIVTMARSMKGKEHIREWNYLLECLQNLDNRQYDMEERVFSVLKFSYVCLNNKLQRFLLYYALSAKEYVEDTYVEKYVEDNYTECLIRKFFYEGWTSDETKSIEMQYNEGYTMLNKLNNNSLLMKENRYWRMHTLLRVMAIDFAKKAGEIMAKPCMKLVEVPKNGEWKENLEKVFLTGNKIQKILDGTSPKCSKLSTLLLDCNYDLESIPNDFFSNMPALKILDLSKTGIRQLPESVSNLECLTALLLSRCEELIYVPSLAKLQRLIELDLSFTAINETPCGLELLVNLLRLNLEGTTQLKMSTSVISKMTNLRSLRLMNSNPRSMDASAQDLQGLEKLEVISVNFCNTEEFNAYVKSFKGKDHVLKNYFLSSATLFDSASHACALESYSLKRVVLSGIDLENRATVLPEDINELFISKCELKDLKQIVAPFAPSLDSPYHYLRDLDVFECSEMKILMMLDLLAQLQNLETISVGFCDSMEEIVGNHYCSGNTFNPTITLPKVRSVKLYCLPELTFVFKGTMLCPSLKYFHAYICEKLSPPHIEIVEGLKLQMENISIGGYCWNYGN 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2029g00003 1048 Gene3D Adenoviral Proteinase; Chain A 4 222 - -
Pral2029g00003 1048 Gene3D - 270 441 IPR027417 -
Pral2029g00003 1048 Gene3D Ribonuclease Inhibitor 629 1028 IPR032675 -
Pral2029g00003 1048 FunFam Probable disease resistance protein At5g66910 441 527 - -
Pral2029g00003 1048 Pfam Leucine rich repeat 675 732 IPR001611 GO:0005515
Pral2029g00003 1048 PRINTS Disease resistance protein signature 307 322 - -
Pral2029g00003 1048 PRINTS Disease resistance protein signature 384 398 - -
Pral2029g00003 1048 PRINTS Disease resistance protein signature 476 490 - -
Pral2029g00003 1048 PRINTS Disease resistance protein signature 696 712 - -
Pral2029g00003 1048 Pfam Ulp1 protease family, C-terminal catalytic domain 89 204 IPR003653 GO:0006508|GO:0008234
Pral2029g00003 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 541 IPR027417 -
Pral2029g00003 1048 ProSiteProfiles Ubiquitin-like protease family profile. 15 192 IPR003653 GO:0006508|GO:0008234
Pral2029g00003 1048 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 221 1019 - -
Pral2029g00003 1048 Coils Coil 208 228 - -
Pral2029g00003 1048 Gene3D - 442 532 IPR042197 -
Pral2029g00003 1048 SUPERFAMILY L domain-like 610 1025 - -
Pral2029g00003 1048 Pfam NB-ARC domain 290 528 IPR002182 GO:0043531
Pral2029g00003 1048 SUPERFAMILY Cysteine proteinases 13 219 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2029g00003 Pral-Chr2029 38697 42873 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2029g00003 304 498 WRKY Transcription Factor Family AT5G45050 25.500 1.08e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2029g00003 - K13459 pcin:129318814 691.034