Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2022g00005 ATGAAGGATCTCAAAAAGAATTCCCGCTTTGAGTCATTTTCCCTGCCGACCCCACCTCCTAATCTCAATGATCAATTTTCTTCCAAGGATGTCATGGATTTCAAATCAAGGGAGTCGATTTTTAATAGCCTTTTTGAGGCTATTAAAGATGGCAAGAACAAGATGGTGGGCCTGTATGGTATGGGGGGCTCAGGTAAAACCACCTTGGCAATCGAAGTGGGTAAGAAAGTTGAACGGCTGAAGCTTTTTGACAAAGTGGTCAAGGTGGTTGTCTCTCGGCCTCTTAATGTTGGGAAAATCCAAGAAGAAATAAAAGGAAAAACAGGTTTGAAATTTGAGGAAGATATCGAATCAACCGCAGCAAGGCTATTAACTGAATTGAAAAGTATGAAAATACTTATAATCTTGGACGATGTTTGGAGCAATCTAAATCTCCAAGAAATTGGTATACCGATTAATGAAAATTGTCGTGTTTTGTTAACTACCCGTCGTCGACATGTTTGTGTCTCTATGGGTTGCGAGAAAAAATTTGAATTGTCTCTCTTAATAGAGGAGGAAGCATGGGATTTGTTAAAGATGCATGCAAACATAACCCATGACTCATTGAATGAGTTTGATGGTGTGGGAAAGAAAATTGTTGATAAGTGCAAGGGACTACCTATTGCAATTGTGACAATGGGAAGGGCATTAAGAGGAAAAGGAATTGTGGAGTGGAAGTCAGCACTATGGAGGCTACAACAAGCCCTACCATTGGATATTGATGATGAGAGTTCAAGGGACCCTTATGCATGTCTCAAATTGAGTTATGATTATTTGCCAACAAGTCTAGCAAAGCAACTCTTCCTATTGTGCTCTATGTTTCCTGAGGATCATCAAATTCATAGAGAGGATCTTATTCGATTTGCTAAAGGGACTTTGAAATTTGAGGGGAATATTGTTTACGCAGTGGAGGATGCAAGGAGGGAGATTTTAGTGAGCATCAATAGTCTATTAGATTCTTGTTTATTAATGCATACGAATGAGCCAGCACGTGTAAAAATGCATGACTTAGTTCGGGATGTAGCTTTATGGATTGCAAGGGAGCAACATCAAGCAATTTTGGTGGATAGCGATGCGGTTTTTAAAATGTTGGCTGAAAATGGAAGTTTGAAAGAGACAAAGGTAATATCATTATGGAATCTGAGAGGCAATTTTCTGCAGTCTAATCAATTGCATTGTCCAACACTTGAGGTTCTGCTACTTCATCCCGAAGGGTTCATTGAAGATCTTGGAGGGATTGAAGCGCTCAAAATCTTGGGCCTTGTAATATCTAGCTTTCAATGGGGACGACTTGGTTGGAAGAGGTCACCTTTTCAGCTAATGCAGAATCAATGGTCAATGCTGCAATCAATTGTGTCATCATTAATTAATCTTCATACCTTATGCATCAGAGGAATTGCATTGGGTGACATCTCTTTTCTAGGTCAACTCAAAGGATTAGAGATTCTTGACTTGCGTGGTTCTCAATTTGATGAATTACCTATTAGAATTGTAGATATGAAAAAATTGAAGCTGTTGGATGTGTTTAGGTGTGAAATTGAGAGAAGTCCTTTAGAAGTTATTGGAAGATGTGAGCAACTTGAGGAATTATACTTTTGGAATAAGAAATTTGTCATCCCAGAAAATTTCTCTCTTTCAAGGTTGAAGAGGTACGTTATCTATGACACCACATCATTGAATATTTCTAGTTATGAAGATCCTCCTCTTGTAGAATATTTTGATGCTCATTGCATTGAAGAACTGAGAGCTTTATGCATACAAGGCTTCAAAGCCTCTGTTTCGAATTCGTCAATGAAAGATCTTATTCTTGGAGCAAACTGCCTTTGGCTAGAGAATTGTAGATGGGATCTTAATGATATAAATTCTGAAATAAAGCACTTAGCAATTTCATGCTGTGTGGAGAAGAGATTCATAGCTGATAGCCTGAGCACCAACAATCTTCAAACAGGACAAGTGTTCTCCCACCTGATTAGTTTAAGATTGAGACAAATGAATAGTCTTGATCGAGTGTTCCAAGATTCATCGATCACATGTTCTCTCCCGATGTTACAAGAGCTGTTTCTAGAGAGGTGTCCAGAATTGGGAACCAGCATCTTCACCCATGCCACTGTTACAAGCCTACCGAAGCTGAGGAAACTTGAGATTGAGGATTGCAGCAAATTGAAATGGCTATTCTCTTATTCTCTGGCTTCTCAGTGTCCTTCGCTAGAGGAATTGCAAATACAGTATTGTTATAAACTTGAGAGGCTCACTGATGAAGAAGATGTGCATGGTGATTGTCTACCGCACCAAAGGGAGCCCCTTCAAGACTACCCATACGGGAATCCGACTGTGGTCACTACTGTAGAAAGCTCCCACCATTCACGCAATCCAAGGAAAAAAAACCGGACTGGACCAGCCGGTTCAACCGAAAAACCGGTGAACCGGTCTGCAGTCCGGTCTGGTTTAATTGGTAAACCGGTAATCAATCAAACCGGTGAAAAACCGGTTCAACCGGTGGTAACCGGTATAGAACCGGGTTATCCCGGTTGGCTGGGTTACCGGTTCTTCTTTAGCGTGAATGAACGAGTTCGACCCACCAACGACGATGGGAATCTCCCTCCTGGAAGTAATGTCGGAGATGACAGAGCCAAGGCGCAAGCAAAAATCTAA 2691 0.4073 MKDLKKNSRFESFSLPTPPPNLNDQFSSKDVMDFKSRESIFNSLFEAIKDGKNKMVGLYGMGGSGKTTLAIEVGKKVERLKLFDKVVKVVVSRPLNVGKIQEEIKGKTGLKFEEDIESTAARLLTELKSMKILIILDDVWSNLNLQEIGIPINENCRVLLTTRRRHVCVSMGCEKKFELSLLIEEEAWDLLKMHANITHDSLNEFDGVGKKIVDKCKGLPIAIVTMGRALRGKGIVEWKSALWRLQQALPLDIDDESSRDPYACLKLSYDYLPTSLAKQLFLLCSMFPEDHQIHREDLIRFAKGTLKFEGNIVYAVEDARREILVSINSLLDSCLLMHTNEPARVKMHDLVRDVALWIAREQHQAILVDSDAVFKMLAENGSLKETKVISLWNLRGNFLQSNQLHCPTLEVLLLHPEGFIEDLGGIEALKILGLVISSFQWGRLGWKRSPFQLMQNQWSMLQSIVSSLINLHTLCIRGIALGDISFLGQLKGLEILDLRGSQFDELPIRIVDMKKLKLLDVFRCEIERSPLEVIGRCEQLEELYFWNKKFVIPENFSLSRLKRYVIYDTTSLNISSYEDPPLVEYFDAHCIEELRALCIQGFKASVSNSSMKDLILGANCLWLENCRWDLNDINSEIKHLAISCCVEKRFIADSLSTNNLQTGQVFSHLISLRLRQMNSLDRVFQDSSITCSLPMLQELFLERCPELGTSIFTHATVTSLPKLRKLEIEDCSKLKWLFSYSLASQCPSLEELQIQYCYKLERLTDEEDVHGDCLPHQREPLQDYPYGNPTVVTTVESSHHSRNPRKKNRTGPAGSTEKPVNRSAVRSGLIGKPVINQTGEKPVQPVVTGIEPGYPGWLGYRFFFSVNERVRPTNDDGNLPPGSNVGDDRAKAQAKI 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2022g00005 896 SMART AAA_5 52 194 IPR003593 GO:0016887
Pral2022g00005 896 MobiDBLite consensus disorder prediction 873 896 - -
Pral2022g00005 896 PRINTS Disease resistance protein signature 126 140 - -
Pral2022g00005 896 PRINTS Disease resistance protein signature 55 70 - -
Pral2022g00005 896 PRINTS Disease resistance protein signature 718 734 - -
Pral2022g00005 896 PRINTS Disease resistance protein signature 216 230 - -
Pral2022g00005 896 Gene3D - 269 356 IPR036388 -
Pral2022g00005 896 Gene3D - 182 268 IPR042197 -
Pral2022g00005 896 MobiDBLite consensus disorder prediction 775 836 - -
Pral2022g00005 896 FunFam Probable disease resistance protein At1g61300 22 176 - -
Pral2022g00005 896 Gene3D Ribonuclease Inhibitor 449 588 IPR032675 -
Pral2022g00005 896 SUPERFAMILY L domain-like 346 764 - -
Pral2022g00005 896 Gene3D Ribonuclease Inhibitor 592 769 IPR032675 -
Pral2022g00005 896 Gene3D - 22 178 IPR027417 -
Pral2022g00005 896 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 4 773 - -
Pral2022g00005 896 Pfam NB-ARC domain 38 270 IPR002182 GO:0043531
Pral2022g00005 896 MobiDBLite consensus disorder prediction 1 25 - -
Pral2022g00005 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 284 IPR027417 -
Pral2022g00005 896 MobiDBLite consensus disorder prediction 808 822 - -
Pral2022g00005 896 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2022g00005 Pral-Chr2022 46015 49859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2022g00005 54 365 WRKY Transcription Factor Family AT5G45050 24.383 5.20e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2022g00005 - - pcin:129306241 883.634