Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2020g00012 ATGGCAGCCGAGAAGAGAGAATCAGAGGTCACCAACAAGACTTCCAATGCCAACTCTAACAACACTAAACTCGAGCAAATCGGAGATTCCTCGCCTCCTTTGGCTTCCGTTTGCGGCGATACTTCTAATAAGGAGGCCGAAGAACGACAGTCTCGTGACCTCAAAGCTGGTCTTCATCCCCTAAAGCACAAATTTGTATTCTGGTATACCCGCCGTACACCTGGAGTTCGAAATCAGACATCATACGAAGACAACATAAAGAGAATTGTTGATTTCAGTACGGTTGAAGGTTTTTGGGTTTGCTATTGCCATCTAGCTCGCCCTTCGTCCTTGCCAGTACCAACAGATTTGCATCTTTTTAAGGAAGGAATTCGCCCTTTATGGGAGGACCCAGCTAATTGTAATGGTGGTAAGTGGATCATACGATTCAAAAAGGTTGTTTCAGGCCGTTTTTGGGAGGACTTGGTTCTTGCCTTAGTAGGTGACCAGCTCGATTATGGGGATAACATATGTGGTGCAGTGCTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGATCATCAGGCCGTGATGGCTCTGAGGGATTCAATTAAACGTCACTTGAAGCTTCCTCATAATTATGTCATGGAATACAAGCCTCACGATGCCTCTTTGCGAGACAATTCATCCTACAGAAACACCTGGTTGAGAGGATAG 717 0.4505 MAAEKRESEVTNKTSNANSNNTKLEQIGDSSPPLASVCGDTSNKEAEERQSRDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKRIVDFSTVEGFWVCYCHLARPSSLPVPTDLHLFKEGIRPLWEDPANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHNYVMEYKPHDASLRDNSSYRNTWLRG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2020g00012 238 MobiDBLite consensus disorder prediction 1 53 - -
Pral2020g00012 238 MobiDBLite consensus disorder prediction 12 29 - -
Pral2020g00012 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 33 231 IPR023398 -
Pral2020g00012 238 SUPERFAMILY eIF4e-like 55 234 IPR023398 -
Pral2020g00012 238 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723|GO:0003743|GO:0006413
Pral2020g00012 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Pral2020g00012 238 FunFam Eukaryotic translation initiation factor NCBP 33 231 - -
Pral2020g00012 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 32 227 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2020g00012 Pral-Chr2020 53252 56534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2020g00012 41 238 Eukaryotic Initiation Factors Gene Family AT5G18110 82.828 1.12e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2020g00012 K03259 - gmx:100499744 416.772