Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2020g00007 ATGAACGATCTTCTATCGGAATCATTTGAAATCCCACGTGGGCATGGAAATGGGGACGTCGAGTTTGGGGCATATTTACGAACTTCAGGAGAACTGGGCTTGGATACTTTCTTCAAAAAGGTTCAAGAGCTTGATAAACAATTTGAGAGGCTGGGTAAGCTTCTCAGACAGCTCCAGGATGCTCACGAGGAGTCCAAAGCGGTGACCAAGGCTCCTGCCATGAAGGATATTAAGCAGAGAATGGAGAAAGATGTTGATGAGGTTAAGAAAATTGCCCATCACATAAAAACGAGAATTGAAGAATTGGACAGAGAAAACCTGGAAAATAGGCAAAAGCGTGGGTGTGGAAAAGGATCAGGTGTCGACAGGTCAAGAACAGCAACCACCGTTGCCTTAAAAAAGAAATTGAAGGACAAGATGGACGAATTTCAGAGGCTGAGGGAAATCATACATCAAGAATATCGCGAGGTTGTAGAGAGGCGTGTTTATACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTGATTGAGACCGGAGATAGTGAACAGATTTTCCAGAATGCCATTAAGGAACATGGAAGAGGCCGGATATTGGACACTCTAGCAGAAATTCAGGAACGGCACGAAGCAGCTAGGGATGTTGAGAGGAAGCTTCTTGACTTGCAGCAGATATATCTAGATTTGGCAGTGTTGGTTGATTCACAAGGAGACATTCTTAACAACATAGAATCCCAGGTATCAACTGCAGTAGATCACGTACAGCAGGGCAATAATGCGCTTGTGAAGGCAAAGAAGTCCCAGAAGAGTTCGAGAAAATGGATGTGCATTGCTATAATAATACTTCTTGTTGTTGTCGCCATCGTTCTTACTTCTGTCCTCAGACCGTGGAGTGACAGAAGGGGGGCCTAG 918 0.4466 MNDLLSESFEIPRGHGNGDVEFGAYLRTSGELGLDTFFKKVQELDKQFERLGKLLRQLQDAHEESKAVTKAPAMKDIKQRMEKDVDEVKKIAHHIKTRIEELDRENLENRQKRGCGKGSGVDRSRTATTVALKKKLKDKMDEFQRLREIIHQEYREVVERRVYTVTGTRADEETIDRLIETGDSEQIFQNAIKEHGRGRILDTLAEIQERHEAARDVERKLLDLQQIYLDLAVLVDSQGDILNNIESQVSTAVDHVQQGNNALVKAKKSQKSSRKWMCIAIIILLVVVAIVLTSVLRPWSDRRGA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2020g00007 305 Coils Coil 85 105 - -
Pral2020g00007 305 CDD SNARE_syntaxin1-like 203 265 - -
Pral2020g00007 305 Coils Coil 133 153 - -
Pral2020g00007 305 Gene3D - 32 158 - -
Pral2020g00007 305 Pfam Syntaxin 37 239 IPR006011 GO:0016020
Pral2020g00007 305 Coils Coil 41 64 - -
Pral2020g00007 305 Gene3D - 201 296 - -
Pral2020g00007 305 SMART SynN_4 29 155 IPR006011 GO:0016020
Pral2020g00007 305 Pfam SNARE domain 241 292 IPR000727 -
Pral2020g00007 305 FunFam Syntaxin 132 29 158 - -
Pral2020g00007 305 SUPERFAMILY t-snare proteins 33 259 IPR010989 GO:0016020|GO:0016192
Pral2020g00007 305 PANTHER SYNTAXIN 37 284 IPR045242 -
Pral2020g00007 305 FunFam Syntaxin 132 197 297 - -
Pral2020g00007 305 CDD SynN 34 191 IPR006011 GO:0016020
Pral2020g00007 305 SMART tSNARE_6 199 266 IPR000727 -
Pral2020g00007 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 204 266 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2020g00007 Pral-Chr2020 28829 33097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2020g00007 1 305 SNARE and Associated Proteins AT3G03800 70.261 4.14e-150 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2020g00007 K08486 - gmx:100306329 465.307