Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2020g00007 | ATGAACGATCTTCTATCGGAATCATTTGAAATCCCACGTGGGCATGGAAATGGGGACGTCGAGTTTGGGGCATATTTACGAACTTCAGGAGAACTGGGCTTGGATACTTTCTTCAAAAAGGTTCAAGAGCTTGATAAACAATTTGAGAGGCTGGGTAAGCTTCTCAGACAGCTCCAGGATGCTCACGAGGAGTCCAAAGCGGTGACCAAGGCTCCTGCCATGAAGGATATTAAGCAGAGAATGGAGAAAGATGTTGATGAGGTTAAGAAAATTGCCCATCACATAAAAACGAGAATTGAAGAATTGGACAGAGAAAACCTGGAAAATAGGCAAAAGCGTGGGTGTGGAAAAGGATCAGGTGTCGACAGGTCAAGAACAGCAACCACCGTTGCCTTAAAAAAGAAATTGAAGGACAAGATGGACGAATTTCAGAGGCTGAGGGAAATCATACATCAAGAATATCGCGAGGTTGTAGAGAGGCGTGTTTATACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTGATTGAGACCGGAGATAGTGAACAGATTTTCCAGAATGCCATTAAGGAACATGGAAGAGGCCGGATATTGGACACTCTAGCAGAAATTCAGGAACGGCACGAAGCAGCTAGGGATGTTGAGAGGAAGCTTCTTGACTTGCAGCAGATATATCTAGATTTGGCAGTGTTGGTTGATTCACAAGGAGACATTCTTAACAACATAGAATCCCAGGTATCAACTGCAGTAGATCACGTACAGCAGGGCAATAATGCGCTTGTGAAGGCAAAGAAGTCCCAGAAGAGTTCGAGAAAATGGATGTGCATTGCTATAATAATACTTCTTGTTGTTGTCGCCATCGTTCTTACTTCTGTCCTCAGACCGTGGAGTGACAGAAGGGGGGCCTAG | 918 | 0.4466 | MNDLLSESFEIPRGHGNGDVEFGAYLRTSGELGLDTFFKKVQELDKQFERLGKLLRQLQDAHEESKAVTKAPAMKDIKQRMEKDVDEVKKIAHHIKTRIEELDRENLENRQKRGCGKGSGVDRSRTATTVALKKKLKDKMDEFQRLREIIHQEYREVVERRVYTVTGTRADEETIDRLIETGDSEQIFQNAIKEHGRGRILDTLAEIQERHEAARDVERKLLDLQQIYLDLAVLVDSQGDILNNIESQVSTAVDHVQQGNNALVKAKKSQKSSRKWMCIAIIILLVVVAIVLTSVLRPWSDRRGA | 305 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2020g00007 | 305 | Coils | Coil | 85 | 105 | - | - | |
Pral2020g00007 | 305 | CDD | SNARE_syntaxin1-like | 203 | 265 | - | - | |
Pral2020g00007 | 305 | Coils | Coil | 133 | 153 | - | - | |
Pral2020g00007 | 305 | Gene3D | - | 32 | 158 | - | - | |
Pral2020g00007 | 305 | Pfam | Syntaxin | 37 | 239 | IPR006011 | GO:0016020 | |
Pral2020g00007 | 305 | Coils | Coil | 41 | 64 | - | - | |
Pral2020g00007 | 305 | Gene3D | - | 201 | 296 | - | - | |
Pral2020g00007 | 305 | SMART | SynN_4 | 29 | 155 | IPR006011 | GO:0016020 | |
Pral2020g00007 | 305 | Pfam | SNARE domain | 241 | 292 | IPR000727 | - | |
Pral2020g00007 | 305 | FunFam | Syntaxin 132 | 29 | 158 | - | - | |
Pral2020g00007 | 305 | SUPERFAMILY | t-snare proteins | 33 | 259 | IPR010989 | GO:0016020|GO:0016192 | |
Pral2020g00007 | 305 | PANTHER | SYNTAXIN | 37 | 284 | IPR045242 | - | |
Pral2020g00007 | 305 | FunFam | Syntaxin 132 | 197 | 297 | - | - | |
Pral2020g00007 | 305 | CDD | SynN | 34 | 191 | IPR006011 | GO:0016020 | |
Pral2020g00007 | 305 | SMART | tSNARE_6 | 199 | 266 | IPR000727 | - | |
Pral2020g00007 | 305 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 204 | 266 | IPR000727 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2020g00007 | Pral-Chr2020 | 28829 | 33097 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2020g00007 | 1 | 305 | SNARE and Associated Proteins | AT3G03800 | 70.261 | 4.14e-150 | 421 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2020g00007 | K08486 | - | gmx:100306329 | 465.307 |