Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2020g00006 ATGAATGCTCCCGTCTTCAAAGAATATACTCTATTGCTCAGTCAAAATGGCACGTTGGAGGTCTGTTTCGATAAGCAGGTCTCCTATGGATCTGGTTATTGGCTGGAAAATTCCTTACAAGTCACCATGCCTCTGTTTTCTCTGCAACTCGCTATAATTTTATCATTGAATCGCCTCTGCATCCTTGCCTCAGCACCGTGGCACTTGCCTCGTATTGTCACTGATATTTTTGCTGGGTTTTTGACTAGTCCAGCTGTTCTGGGTCGCTCTCCTTTTTATGTCAAACACATATTCCCTTTCAGTAGTATGATGGCATTGGAAACCGTGGCAGCTTTGACCCTTGTTTACTATATGTTCTTGATCGGTTTAGAGTTTGATTTGAGACCGATAAGGCGTTCTGGGAACAAGAAGGCTATAATTGTAGCCACTGCTGGTATAATCTTCTCTATTCCTTTTGGGATTGGATTGTATTACCTGCTTCTCTCTGACTTGGGACGCAAGCACTTGTCTCCTACGATAACTGGAACGAGACATTTCACCGGTGCTATGATATGGGGAATGACCCTTTCTTGCAGCGAGTTCCCTGAGATCGCGAAGATTCTCACGAGCCTCAAGCTTGTTCTCGACGACAATGGACAATTGGCTTTAACCTCTGCTCTCATCAACGACGTCTTCTCTTGGATCTTCCTTGTAATATCAATAGCAGCACTCCATGGAGCTTCAGGAGCATCCATCGCCTCCACCATTGTCTTTCTTTTAATAGGGATCTACGTGGTTCATCCCCTTGCCCAGTGGCTCTTCCAGAAAGTTGGCACAAAGGACAGAGATTTGATTGACGCTCAAGTTGTGTTTCTCTTGCATATGGTTTTGCTCTTTGGATTCCTCGCCGATGGATTCGGAGCTCATTCCATCACAGGGGCTTACGTTTTAGGAGCTATCACCCCAAAGGGTATAATCTCAAAGGCGGTTCAGGAAAAAGTGCTTGATTTTGTGACAGCATTCATGATGCCAGTCTTCTTTGCGGTTCTTGCGGAGAGAATCCATGTCGAAGACTTCGCCTTGGGCATCCATTGGATAAGCGTTGTGGTGATTGTTTTGCTGGCTTTCATGGCCAAGATTTTGTCCACTCTAGCCGTCTATATGCTCCACAGGCTGCCTCTCAAGGAAGGCATCTCTCTTGGAGTACTCATGAATACCAAAGGAATAGTGTCAATCATCATTCTTTCCACCGGCAGGGACATGCTGGCACTGAACGACCAAACCTTTGGGGTTATGCTTCTGATATGCTGGATAATGACGATTCCCGCGGAGCCTGTCTTAGCCGCCATAAGCAAATTCACGAGTCCCAGTATTGGGAGTAGCCTACGTAGGACCATGCTGGGGACAAGACCGGACATGCCGCTCAGAGTGCTTGCCTGTGTCCACACATCACGCGACGCCAATGTGATTGTCAGTCTGTTGAAGGAATCGAACCCAACGGTTAAATCCCCAATCCAGGTTTTCGCGGTAGAGCTTGTGAAGATGACAAGCCGCCCCACCACAGCACTAATCCTAGATGATGCTCATAAGCAAGTAATGGAGTCCAAATCTAAGAAAGACCTCTTGCGAGGTCTCAATCCAGACGGCAACAACAAGACAGGGACAGAAGATAGCCTTGAGTGCTTCGAAAACCTTAGCCAAGCTATATTCGCTGAGAAGTTAAGGGTCGTGTCTGATTACAACACCATGCACAAAGACATGTTCCATCTAGCGAAGCAAAAAGGAGTGACACTCATGCTAACCACACTTTACAAACAACCGACATACGATGGTTTAGGTGCAGGCACAGCCACAGCTAGAGCTGCTAACATAGTGAACAGAGAATCTTCGAGCAAGGATGAGAAAAAAGTAGTGCTTGAGAACCTAGTGAAGGAAACACCATGCTGTCTGGGGATATTCATAGATCGTGGGTTAGGCCAAAAGCGAGGCAAAGAGCAGAAATTGGCAATGTTCTACGTGGGTGGGGCAGATGATCGTGAAGCATTGTCGTACGCATGGAGGATGTGTAGAAGCCCAAACACAAAATTAACAGTGGTAAGGATCATCTGGGACAATCCCAGTGACGGATTTGATCAAACAGATGAAGAGTACCTAACATTCTTCAAAATCCAAACGAGAGACATGGGGGGATCGGTGAAGTACATAGAGAAAGTGGTGAGAGACGAGAAGGAGACGTTGGCGTTGCTGAACAGTGTGGGAGACAATGGGTACGATTTGTACATAGCAGGGAGAGGGCAAGGAAGGAGGATGTCGCTGGCACAAACGCTTGACCCTGTGCTGGAGGAGCCGGCGTTGGGGCCACTCGGCGATACGTTGGCGGATTTGAATTCTGCGGCGGAGACTTCGATTTTGATATTGCAGTCGCAAGCTAGCGGTGATGGGAATGCGGAGCCAGCGCCGTCTGAGTATGCTTATTTTGAAGGACACGGCGATCTAATGCTGCGTGGAGGGCGTATGGCATGGCGGGCTTCTGATTTTAATTGA 2523 0.4752 MNAPVFKEYTLLLSQNGTLEVCFDKQVSYGSGYWLENSLQVTMPLFSLQLAIILSLNRLCILASAPWHLPRIVTDIFAGFLTSPAVLGRSPFYVKHIFPFSSMMALETVAALTLVYYMFLIGLEFDLRPIRRSGNKKAIIVATAGIIFSIPFGIGLYYLLLSDLGRKHLSPTITGTRHFTGAMIWGMTLSCSEFPEIAKILTSLKLVLDDNGQLALTSALINDVFSWIFLVISIAALHGASGASIASTIVFLLIGIYVVHPLAQWLFQKVGTKDRDLIDAQVVFLLHMVLLFGFLADGFGAHSITGAYVLGAITPKGIISKAVQEKVLDFVTAFMMPVFFAVLAERIHVEDFALGIHWISVVVIVLLAFMAKILSTLAVYMLHRLPLKEGISLGVLMNTKGIVSIIILSTGRDMLALNDQTFGVMLLICWIMTIPAEPVLAAISKFTSPSIGSSLRRTMLGTRPDMPLRVLACVHTSRDANVIVSLLKESNPTVKSPIQVFAVELVKMTSRPTTALILDDAHKQVMESKSKKDLLRGLNPDGNNKTGTEDSLECFENLSQAIFAEKLRVVSDYNTMHKDMFHLAKQKGVTLMLTTLYKQPTYDGLGAGTATARAANIVNRESSSKDEKKVVLENLVKETPCCLGIFIDRGLGQKRGKEQKLAMFYVGGADDREALSYAWRMCRSPNTKLTVVRIIWDNPSDGFDQTDEEYLTFFKIQTRDMGGSVKYIEKVVRDEKETLALLNSVGDNGYDLYIAGRGQGRRMSLAQTLDPVLEEPALGPLGDTLADLNSAAETSILILQSQASGDGNAEPAPSEYAYFEGHGDLMLRGGRMAWRASDFN 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2020g00006 840 PANTHER CATION/H + ANTIPORTER 27 803 - -
Pral2020g00006 840 Gene3D - 45 449 IPR038770 -
Pral2020g00006 840 Pfam Sodium/hydrogen exchanger family 57 434 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2020g00006 Pral-Chr2020 24509 27255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2020g00006 21 800 Antiporter Super Family AT2G13620 33.251 9.32e-141 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2020g00006 K26731 - vvo:131609937 885.56