Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2020g00004 ATGGTCTCGGTGGTGTCTTCTCACGGAGTGATCCCTTCCGAACCCACACCGACTGGAATTTTCCCTCTCTCCGATTTCGACCAGATCAGGCTCTCCAGTCACGCCCCTCTCCTTTTTGTTTACAGACCCCATTTCAACGACCACGCCCCCCTTCCTTTCTCCATTCACACTCTCGCCAAATCTCTAAGCCGAGCCCTGGTTCACTTCTATCCCTTCGCCGGTCAGTTACGTGAAATCCAAGGTGGTCGCTTTCAACTCCATTGCAATGCTATGGGAGCTCGGCTCTTAGAAGCAGTTTCGGAGGCCAAGTTGGATGATTTGGGTGATTTCCAGCCAAACCAAGATGTGGAACAGCTCATGCCCAAAATTGATTATCGTCTTCCGCTGGAGGAGATTCCGCTCTTGGTGGTTCAGCTAACCAGATTCCGTTGTGGTGGTCTTACTCTTGGGGTTGCCGTATCACGTGCTGTGGTTGATGGGGTATCTGCTATGCGTTTCGTGATTTCATGGGCTAGGATAACTAGAGGAGAGGGTTTAGATTTAAGCTCAAGTGAAATGCTACTTCGTGATTCAACTATTTTAGATTCGCGAAAGCCATGTACGGCGCCGCGTTTTGATCATCCTGAGTTTTCTCCTCCACCCCTTTGGGAAGGTAGCTTGGTAGATGCAGAGGATGAGGCTGATACTGCTATTTTGAAGATCACAAAAAATCAAGTTCAAAAACTGAAGGAAAAAGCCAGTAATTTTGGTCCTCCCCGACGGTCCTATACGAGTTTTGAGGTAATCTCTGGGTTGTTGTGGAGATGTGCCTGTAAGGCACGGTATGAAGGAAATGGCAACCAACCAACGAGGCTGTCCACTTTGGTTGACTGTCGAAATCGATTGAGACCACCTCTTCCTAATGCTTTCTTTGGAAATGTAACATTACCCACCGTGACTAAAACTAGTAAGTTTGATGATGTCATGAGTAAACCTGTGAGTTATGCCGTTGGGGAAATAAGACAAGCATTAGAGAAGCTGACAGATTCTTATGTGAGGTCAGCTCTTGATTACATAGCAGGTCAGAACGATGTGAGATTGCTGAGGAACGCTGGTCCTGGAAAATTCAAGGGAAACCCAAATCTAACTCTTGTTAGTTGGATGAATTTTTCATTTCAGGATGCTGATTTTGGGTGGGGAAAACCTGTTTATATGGGACCAGGAAATATTAACTCCGAGGGGAAAGCTTTCTTGATGAATGATGGCGCTGGTGATGGCTTCATTGTAGCCATACGTTTGCAAGCGTCACGTTTGGCAGCTTTCAAGAAGTTGTTCTACGAGGAAGCACGGGGGATGTTACATACTACTTCCAAATTATGA 1359 0.4643 MVSVVSSHGVIPSEPTPTGIFPLSDFDQIRLSSHAPLLFVYRPHFNDHAPLPFSIHTLAKSLSRALVHFYPFAGQLREIQGGRFQLHCNAMGARLLEAVSEAKLDDLGDFQPNQDVEQLMPKIDYRLPLEEIPLLVVQLTRFRCGGLTLGVAVSRAVVDGVSAMRFVISWARITRGEGLDLSSSEMLLRDSTILDSRKPCTAPRFDHPEFSPPPLWEGSLVDAEDEADTAILKITKNQVQKLKEKASNFGPPRRSYTSFEVISGLLWRCACKARYEGNGNQPTRLSTLVDCRNRLRPPLPNAFFGNVTLPTVTKTSKFDDVMSKPVSYAVGEIRQALEKLTDSYVRSALDYIAGQNDVRLLRNAGPGKFKGNPNLTLVSWMNFSFQDADFGWGKPVYMGPGNINSEGKAFLMNDGAGDGFIVAIRLQASRLAAFKKLFYEEARGMLHTTSKL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2020g00004 452 Gene3D - 220 441 IPR023213 -
Pral2020g00004 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 439 - -
Pral2020g00004 452 Gene3D - 1 212 IPR023213 -
Pral2020g00004 452 Pfam Transferase family 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2020g00004 Pral-Chr2020 17735 19093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2020g00004 2 440 Monolignol Biosynthesis Gene Families AT5G48930 37.162 2.97e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2020g00004 K13065 - qsa:O6P43_006188 489.96