Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00127 ATGGATAGAGTGCTTTCAGTGGAGGAAATTTCTGAACAGTTTTGGTCGCCGCCGGTATCCACCGTAAAGGATGAATCCTCCTCCGGGATGAATCGCAGTGCTTCCGAGTGGGCCTTCCAGCGATTTCTCCAAGAAGCTTCTGCTTCCCATGCTCCTCGCCCTTCTCCTTCCTCCCGTCCTGACAAAAACGACGAGCCTAATCTTGAGATTAAGGAGCAGCCCAAACCCAGACAGGACCTCACGGCGCCATCCATTCCCAAGAATGCTGCTGGCTTTCCCAATGCACCTTCTCCAAGCGTCCCTGTCGATTCTGAGCAGTACCAGGCTATCCTTAAGAGCAAACTCAATCTCGCTTGCGCTGCGGTCGCCTTGACTCGGCAGGGTTCCTTAGCCAAGTCCCAAGATCCAGCCACTTTACCTAATGGCGTATCAAAGGCCAATAAAACTTCTCAAGCTGGATCTCCTGCTACCTTAGAAGGACATGATCCATCTAACATACCCGATAAAGATGCGAAGGGACCAGTTGCAATTCCTTCATTACCTGCCGTTCAAAAGAAACTGGCGATTGCAACCAAGCCAACAACCAGTGGATCATCGAGGGATCTGTCTGATGATGAGGAGGTTGAAGTGGAGACTGAAAATATGGAACCTGCAGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCGGCCAGACGCTCGAGAAGAAGAAAGCAGGCTCATATAACTGAGCTTGAAACACAGGTTGCTCAATTAAAAGTAGAAAATTCATCATTGTTAAAGCGTCTTGCTGACATAAGCCAGAAGTACAATGAAACTGCTGTTGACAACAGAGTCTTGAAAGCTGACGTCGAAACATTAAGAGCAAAGGTAAAGATGGCCGAAGAGACCGTGAAAAGAATAACTGGGTTAAACCCAATGTTCAGTGCCATGTCTGAGATATCATCGATGGGTATGGCATCATTTGATGGAAGTCCTTCCGACGCATCAGATGCAGCTGTACCTGTGCAAGATGACGCTAACCATCACTTCTATCAACTCACTTCTAATAATTCTTTGTCCGGGCCTGATTCAAGAGTCAACAATGGAGTTGGAGATATTTCTTCCATGGAAAATGTGCAGCAGAACCCCGCGGCAATGGCAACTGGAAACAAGATGGGGAGAACAGGTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGCATCCGTGGAGGTGGTGCAGATTCTTGTAGTCGGCCCTGCAATGGAGAGCAGTAA 1272 0.4843 MDRVLSVEEISEQFWSPPVSTVKDESSSGMNRSASEWAFQRFLQEASASHAPRPSPSSRPDKNDEPNLEIKEQPKPRQDLTAPSIPKNAAGFPNAPSPSVPVDSEQYQAILKSKLNLACAAVALTRQGSLAKSQDPATLPNGVSKANKTSQAGSPATLEGHDPSNIPDKDAKGPVAIPSLPAVQKKLAIATKPTTSGSSRDLSDDEEVEVETENMEPADAKRVRRMLSNRESARRSRRRKQAHITELETQVAQLKVENSSLLKRLADISQKYNETAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFSAMSEISSMGMASFDGSPSDASDAAVPVQDDANHHFYQLTSNNSLSGPDSRVNNGVGDISSMENVQQNPAAMATGNKMGRTGSLQRVASLEHLQKRIRGGGADSCSRPCNGEQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00127 423 SMART brlzneu 217 281 IPR004827 GO:0003700|GO:0006355
Pral2018g00127 423 MobiDBLite consensus disorder prediction 57 76 - -
Pral2018g00127 423 MobiDBLite consensus disorder prediction 127 215 - -
Pral2018g00127 423 Pfam Basic leucine-zipper C terminal 288 410 IPR020983 -
Pral2018g00127 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 224 239 IPR004827 GO:0003700|GO:0006355
Pral2018g00127 423 Coils Coil 279 299 - -
Pral2018g00127 423 CDD bZIP_plant_GBF1 222 273 IPR045314 GO:0003700|GO:0006355
Pral2018g00127 423 FunFam BZIP transcription factor 219 270 - -
Pral2018g00127 423 Coils Coil 230 271 - -
Pral2018g00127 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 219 274 IPR004827 GO:0003700|GO:0006355
Pral2018g00127 423 Pfam bZIP transcription factor 220 273 IPR004827 GO:0003700|GO:0006355
Pral2018g00127 423 Gene3D - 220 276 - -
Pral2018g00127 423 SUPERFAMILY Leucine zipper domain 221 271 IPR046347 GO:0003700|GO:0006355
Pral2018g00127 423 MobiDBLite consensus disorder prediction 127 158 - -
Pral2018g00127 423 MobiDBLite consensus disorder prediction 13 42 - -
Pral2018g00127 423 PANTHER BASIC LEUCINE ZIPPER 63 1 415 - -
Pral2018g00127 423 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00127 Pral-Chr2018 598717 602346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00127 1 310 bZIP Transcription Factor Family AT4G02640 39.941 4.20e-46 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral2018g00127 bZIP_C 1.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00127 K25784 - qsa:O6P43_007630 479.944