Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00126 ATGGATAGAGTGCTTTCAGTGGAGGAAATTTCTGAACAGTTTTGGTCGCCGCCGGTATCCACCGTAAAGGATGAATCCTCCTCCGGGATGAATCGCAGTGCTTCCGAGTGGGCCTTCCAGCGATTTCTCCAAGAAGCTTCTGCTTCCCATGCTCCTCGCCCTTCTCCTTCCTCCCGTCCTGACAAAAACGACGAGCCTAATCTTGAGATTAAGGAGCAGCCCAAACCCAGACAGGACCTCACGGCGCCATCCATTCCCAAGAATGCTGCTGGCTTTCCCAATGCACCTTCTCCAAGCGTCCCTGTCGATTCTGAGCAGTACCAGGCTATCCTTAAGAGCAAACTCAATCTCGCTTGCGCTGCGGTCGCCTTGACTCGGGGTTCCTTAGCCAAGTCCCAAGATCCAGCCACTTTACCTAATGGCGTATCAAAGGCCAATAAAACTTCTCAAGCTGGATCTCCTGCTACCTTAGAAGGACATGATCCATCTAACATACCCGATAAAGATGCGAAGGGACCAGTTGCAATTCCTTCATTACCTGCCGTTCAAAAGAAACTGGCGATTGCAACCAAGCCAACAACCAGTGGATCATCGAGGGATCTGTCTGATGATGAGGAGGTTGAAGTGGAGACTGAAAATATGGAACCTGCAGATGCAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCGGCCAGACGCTCGAGAAGAAGAAAGCAGGCTCATATAACTGAGCTTGAAACACAGGTTGCTCAATTAAAAGTAGAAAATTCATCATTGTTAAAGCGTCTTGCTGACATAAGCCAGAAGTACAATGAAACTGCTGTTGACAACAGAGTCTTGAAAGCTGACGTCGAAACATTAAGAGCAAAGGTAAAGATGGCCGAAGAGACCGTGAAAAGAATAACTGGGTTAAACCCAATGTTCAGTGCCATGTCTGAGATATCATCGATGGGTATGGCATCATTTGATGGAAGTCCTTCCGACGCATCAGATGCAGCTGTACCTGTGCAAGATGACGCTAACCATCACTTCTATCAACTCACTTCTAATAATTCTTTGTCCGGGCCTGATTCAAGAGTCAACAATGGAGTTGGAGATATTTCTTCCATGGAAAATGTGCAGCAGAACCCCGCGGCAATGGCAACTGGAAACAAGATGGGGAGAACAGGTTCCCTGCAGCGGGTGGCTAGCTTGGAACATCTTCAGAAGCGCATCCGTGGAGGTGGTGCAGATTCTTGTAGTCGGCCCTGCAATGGAGAGCAGTAA 1269 0.4838 MDRVLSVEEISEQFWSPPVSTVKDESSSGMNRSASEWAFQRFLQEASASHAPRPSPSSRPDKNDEPNLEIKEQPKPRQDLTAPSIPKNAAGFPNAPSPSVPVDSEQYQAILKSKLNLACAAVALTRGSLAKSQDPATLPNGVSKANKTSQAGSPATLEGHDPSNIPDKDAKGPVAIPSLPAVQKKLAIATKPTTSGSSRDLSDDEEVEVETENMEPADAKRVRRMLSNRESARRSRRRKQAHITELETQVAQLKVENSSLLKRLADISQKYNETAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFSAMSEISSMGMASFDGSPSDASDAAVPVQDDANHHFYQLTSNNSLSGPDSRVNNGVGDISSMENVQQNPAAMATGNKMGRTGSLQRVASLEHLQKRIRGGGADSCSRPCNGEQ 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00126 422 Coils Coil 278 298 - -
Pral2018g00126 422 SMART brlzneu 216 280 IPR004827 GO:0003700|GO:0006355
Pral2018g00126 422 Gene3D - 219 275 - -
Pral2018g00126 422 MobiDBLite consensus disorder prediction 57 76 - -
Pral2018g00126 422 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 218 273 IPR004827 GO:0003700|GO:0006355
Pral2018g00126 422 Coils Coil 229 270 - -
Pral2018g00126 422 MobiDBLite consensus disorder prediction 130 157 - -
Pral2018g00126 422 Pfam Basic leucine-zipper C terminal 287 409 IPR020983 -
Pral2018g00126 422 CDD bZIP_plant_GBF1 221 272 IPR045314 GO:0003700|GO:0006355
Pral2018g00126 422 FunFam BZIP transcription factor 218 269 - -
Pral2018g00126 422 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 223 238 IPR004827 GO:0003700|GO:0006355
Pral2018g00126 422 MobiDBLite consensus disorder prediction 128 214 - -
Pral2018g00126 422 Pfam bZIP transcription factor 219 272 IPR004827 GO:0003700|GO:0006355
Pral2018g00126 422 SUPERFAMILY Leucine zipper domain 220 270 IPR046347 GO:0003700|GO:0006355
Pral2018g00126 422 MobiDBLite consensus disorder prediction 13 42 - -
Pral2018g00126 422 PANTHER BASIC LEUCINE ZIPPER 63 1 414 - -
Pral2018g00126 422 MobiDBLite consensus disorder prediction 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00126 Pral-Chr2018 598717 602346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00126 1 309 bZIP Transcription Factor Family AT4G02640 39.466 1.44e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral2018g00126 bZIP_C 1.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00126 K25784 - qsa:O6P43_007630 484.567