LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2018g00111	ATGCACAGCGAGACGAGTGTGTTGCTATGTCTCGTGTGCATCTTGGGTTTCCTGAGAACCCCGGAAGCATGGGCCAAGGGCGAAGAGCCGTTGGTCTTGGGTTGTGGGCTGGCCGACGGTGGCGGCAAGGATGCCGATGGAAGGCAATGGGAGGCAGATACTAAGTACTTGTCGGGAGGTGATTCAACAACGTTCAAAGCATTGTACCAAGACCCTTCGGTCATGTCCGAGATTCCATACATGTGGGCACGAGTTTTCACCTCAGTGGCAACGTATAAATTCCCAGTTCTACCCGACAAGCGTTATTGGCTTCGCCTCCACTTTTACCCCTCCGTTTATGGTTCCTATAATCCGAGCAATTCATATTTCTCCGTAACGGCCAACGGGGTTACGCTTTTGAGCAACTTCAGCGCTTCTATTACTTGTCAGGCCCTGTCTCAAGCTTACATTGACAGAGAGTATTCCCTTGCCCCTTTGAATTCAGATACTCTCACGGTTACTTTTAAGCCATCAGACAAGTACGATCAAGCTTTTGCTTTTGTTAACGGGATCGAGGTGATTCAAATGCCAGATTTGTTTGATTCAGCCATTTTAGTTGGGCATTCCGAACAAACCGTTGATGCAAAAAGCACGAATTTGCAGACAATGTTTAGGCTCAATGTTGGTGGGCAATATATACCGCCACTCCAAGATTCTAATCTTACAAGGACATGGTACGATGATACGCCTTATTTATATGGCGCATCAGTTGGGGACACCAGTCAAGCTGCTGACGATGTCACTATCGACTACCAAACCATGCCACATTACATTGCTCCTCCCAGTGTCTACTCTACGTCAAGATCGATGGGGAACGATCAGAACGTGAACATGGGATATAACCTCACCTGGACATTCCAAATTGATCCAAATTTCATGTACCTCGTGAGGTTTCACTTCTGTGATTATTATTTTTCTAGAGTGAACGAGATAGTTTTCGATATCTACGTGAACAATCAAACGGCACAGGCCGAAGCAGATGTAATAGCGTGGACAGGGGGAAAAGGAGTGCCAACGTACAAGGACTATGTGGTGATTGTGCAAGATGGGCAGGGCAGCGAGCAATTATGGATCGCTCTGCATCCATCGCCCGAAACAAAGCCTGAGTACTATGATGCAATATTGAGTGGGGTAGAGATATTCAAGATCAATGGCACAGCCTTGGCTGGGCCAAATCCTCAACCGTCAGATATGCTGGTGAAGAGTAAGCAAAAATCGCAGACTTTTAACACACCCAGAAGCAGTCACAAAAAGACCGTATTATTAAGTGCCGGAGGAGCCGCGGGAGTTGCATTCTTAGCTGCAATATGCATTGTTGTGTACCAGAAGAAGAAGAGAGCGCCGGGATCAGATTCACATACATCATGGCCACCAATCTATGGGAATTCCCATTCAAATGGCAGTAGATCCACGATGTCAGGGAAAAGCTATGCTGGAAGCAACATATCGGCCATGGCTCAGGGTCTTTGTCGCTATTTTTCCCTGCAGGAAATCAAGCAAGCGACCAAGAATTTCGACGAGTCTAATGTCATTGGGGTTGGAGGATTTGGGAAGGTTTATAAGGGTGTTATAGACAACGGGATGAAAGTGGCCATTAAAAGGTCGAATCCACAATCAGAACAGGGAGTGAATGAGTTCCAGACTGAAATTGAGATGCTTTCGAAACTAAGACACAAGCATTTGGTGTCCTTGATTGGGTTCTGTGAGGAGCAGAATGAGATGTGCCTTGTTTATGACTACATGGCTCGCGGCACCCTAAGGGAGCATCTATACAAGAGCAGCAAATCTCTGTCTACTTTGTCGTGGAAACAAAGGTTGGAGATTTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACTGGGGCCAAATACACCATCATCCATAGGGATGTCAAGTCAACTAACATTCTATTGGATGAAAGTTGGACTGCCAAGGTTTCAGATTTCGGGTTATCAAAAACAGGTCCGGACATGAAAAATGGGCATGTTAGTACAGTGGTGAAGGGAAGCTTCGGATATTTGGACCCTGAATATTTCAGGAGACAACAGCTGACCGAGAAGTCTGATGTGTATTCATTTGGAGTGGTCTTGTTCGAGGTTCTATGCGCAAGGCCGGTTTTGAATGCTAACCTTCCAAAGGAGCAAGTGTCTCTTGCGGATTGGGCTTTGAGCTGCAAAAGAAAGGGGACGTTGGAGGATATTATTGACCCGCGTCTGAAAGGAAAGATCAACCCAGAAAGTTTGAGCAAGTTTGCAGACACAGCAGAGAAGTGTTTGAGTGATCATGGGCTTGCCCGACCCTCGATGAATGATCTGTTGTGGAATCTAGAACTTGCTCTTAACCTCCAACAAAGCACAAATGGATCGAATAACTCTTGGGAGGAAAGCGAGCTTCAAGGGGCGTGTTTGCGAGACAATGACGTGGCAAAGCTTATCCGTACAGGTGAGCATGAGGCAGGCCAAGATTCTGCTGATACTTCACAAGTTATCTTCTCACAAATCGTCAATCCTACGGGACGATGA	2565	0.4651	MHSETSVLLCLVCILGFLRTPEAWAKGEEPLVLGCGLADGGGKDADGRQWEADTKYLSGGDSTTFKALYQDPSVMSEIPYMWARVFTSVATYKFPVLPDKRYWLRLHFYPSVYGSYNPSNSYFSVTANGVTLLSNFSASITCQALSQAYIDREYSLAPLNSDTLTVTFKPSDKYDQAFAFVNGIEVIQMPDLFDSAILVGHSEQTVDAKSTNLQTMFRLNVGGQYIPPLQDSNLTRTWYDDTPYLYGASVGDTSQAADDVTIDYQTMPHYIAPPSVYSTSRSMGNDQNVNMGYNLTWTFQIDPNFMYLVRFHFCDYYFSRVNEIVFDIYVNNQTAQAEADVIAWTGGKGVPTYKDYVVIVQDGQGSEQLWIALHPSPETKPEYYDAILSGVEIFKINGTALAGPNPQPSDMLVKSKQKSQTFNTPRSSHKKTVLLSAGGAAGVAFLAAICIVVYQKKKRAPGSDSHTSWPPIYGNSHSNGSRSTMSGKSYAGSNISAMAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGVIDNGMKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEQNEMCLVYDYMARGTLREHLYKSSKSLSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKSTNILLDESWTAKVSDFGLSKTGPDMKNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVLNANLPKEQVSLADWALSCKRKGTLEDIIDPRLKGKINPESLSKFADTAEKCLSDHGLARPSMNDLLWNLELALNLQQSTNGSNNSWEESELQGACLRDNDVAKLIRTGEHEAGQDSADTSQVIFSQIVNPTGR	854

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2018g00111	854	FunFam	receptor-like protein kinase FERONIA	481	593	-	-
	Pral2018g00111	854	MobiDBLite	consensus disorder prediction	460	486	-	-
	Pral2018g00111	854	ProSiteProfiles	Protein kinase domain profile.	518	792	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2018g00111	854	FunFam	FERONIA receptor-like kinase	211	397	-	-
	Pral2018g00111	854	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	640	652	IPR008271	GO:0004672\|GO:0006468
	Pral2018g00111	854	Pfam	Protein tyrosine and serine/threonine kinase	522	730	IPR001245	GO:0004672\|GO:0006468
	Pral2018g00111	854	PANTHER	OS07G0166700 PROTEIN	502	797	IPR045272	GO:0004714\|GO:0006468
	Pral2018g00111	854	Pfam	Malectin-like domain	34	396	IPR024788	-
	Pral2018g00111	854	CDD	STKc_IRAK	524	791	-	-
	Pral2018g00111	854	MobiDBLite	consensus disorder prediction	468	486	-	-
	Pral2018g00111	854	SMART	serkin_6	518	793	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2018g00111	854	FunFam	FERONIA receptor-like kinase	30	190	-	-
	Pral2018g00111	854	SUPERFAMILY	Protein kinase-like (PK-like)	493	792	IPR011009	-
	Pral2018g00111	854	Gene3D	-	212	397	-	-
	Pral2018g00111	854	Gene3D	-	35	190	-	-
	Pral2018g00111	854	ProSitePatterns	Protein kinases ATP-binding region signature.	524	546	IPR017441	GO:0005524
	Pral2018g00111	854	Gene3D	Phosphorylase Kinase; domain 1	478	593	-	-
	Pral2018g00111	854	Gene3D	Transferase(Phosphotransferase) domain 1	594	815	-	-
	Pral2018g00111	854	FunFam	Receptor-like protein kinase FERONIA	594	808	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2018g00111	Pral-Chr2018	533417	536168	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2018g00111	29	854	Receptor kinase-like Gene Family	AT3G51550	54.076	0.0	862

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral2018g00111		Malectin_like	2.1e-37	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2018g00111	-		-	gmx:102659961	1242.25