Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2018g00081 | ATGTCTTCATCTTTTCCTCTTCTTCCCACTCGTATTGAAGACAAATATATGAAACCTCTAGATTCTTTTTCCTTGACTGCAGGAGACCTGACTGCAAATCCTGCCTCAGTACAGGCTGCTTCATCAGACTCCAACATTAAAAGCGGTGGGCACATGTTTTCATCACCTTCTAAATGCCTGAATGGCATCGCTTTTTCTTCCTCAATTTCTCAACATGATAGGCAGCATCAAAATTCTCCCTTCATTTCTAAGACATTGAGAAGAGACGATGTAATGCCCCCGCAAGGAACTTCCCTTACTCAGAGTGGGGAAGATGCGTCTTTCCCACCTTCACATTCTTGTTATCCGGAAATACACTCGGCAGCATTCGTTTCTCGACCCCCAGAAAGTGATGATATTTCATGGGGACCAGATCCCTTTCAGGATATTCTTAATCTATCTGTAAATGATTCCGTACAGAACGATCAGATGGAAAATAGTTCTTGTTTTATGTCTGATGACAACTCCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATGTCAGTCGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAATGTACCGGATTCGAAATCAGAGGGGACCCACTCCACCAAGCAGCAGGATGCACCATCTGGAGAAGTTAATGCTCCTCCTACTTCAGCAACGAATGCACTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAGTGAGAAGGCTACTCCTAAGGGTGTTTTGAACCTAATGAAAGTTGAGGGTCTTACTATATATCATGTGAAAAGCCATCTGCAGAAGTATAGAACAGCCAGATTCAAGCCCGAATCATCAGGAGGAGCCTCTGAGAAGAAGTCAACGTCAACCAAAGAAATGAAATCTTCAGACTCGACAGCCATGGGGATTACTGAGGCGTTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAAAGAGAAATGGAGGACGGCAAACACAAGACATTACCCTCCTCCTTAGACGGGCCCACGGTATTAAATTCCCCCGCGATTGAGGGTCAAGAAACATCTGGAATCAGCAGTATCAATGCAACAACCGCGGGCGAAGAATGTTCTGGGGATGCCTGCACAAAGCAAGAGGTGGAAGGAACTAAAGTTACTAATGAAGAAGAGGCGGGGCATGACCAGTTGGGTGCACCGGCCTCCAAACGGGCGAAAAGCAGGTGA | 1344 | 0.4501 | MSSSFPLLPTRIEDKYMKPLDSFSLTAGDLTANPASVQAASSDSNIKSGGHMFSSPSKCLNGIAFSSSISQHDRQHQNSPFISKTLRRDDVMPPQGTSLTQSGEDASFPPSHSCYPEIHSAAFVSRPPESDDISWGPDPFQDILNLSVNDSVQNDQMENSSCFMSDDNSKKTDFGEWVDQLMSVDESPHPNWSQLLVDDNVPDSKSEGTHSTKQQDAPSGEVNAPPTSATNALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARFKPESSGGASEKKSTSTKEMKSSDSTAMGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEKQREMEDGKHKTLPSSLDGPTVLNSPAIEGQETSGISSINATTAGEECSGDACTKQEVEGTKVTNEEEAGHDQLGAPASKRAKSR | 447 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2018g00081 | 447 | Gene3D | - | 235 | 294 | - | - | |
Pral2018g00081 | 447 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 233 | 293 | IPR017930 | - | |
Pral2018g00081 | 447 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 227 | 418 | IPR044848 | GO:0003700 | |
Pral2018g00081 | 447 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 236 | 290 | IPR006447 | GO:0003677 | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 69 | 109 | - | - | |
Pral2018g00081 | 447 | Coils | Coil | 323 | 343 | - | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 94 | 108 | - | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 188 | 238 | - | - | |
Pral2018g00081 | 447 | Pfam | MYB-CC type transfactor, LHEQLE motif | 320 | 366 | IPR025756 | - | |
Pral2018g00081 | 447 | SUPERFAMILY | Homeodomain-like | 234 | 290 | IPR009057 | - | |
Pral2018g00081 | 447 | FunFam | Myb family transcription factor | 235 | 293 | - | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 69 | 84 | - | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 379 | 411 | - | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 211 | 237 | - | - | |
Pral2018g00081 | 447 | Pfam | Myb-like DNA-binding domain | 238 | 289 | IPR001005 | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 290 | 318 | - | - | |
Pral2018g00081 | 447 | MobiDBLite | consensus disorder prediction | 365 | 447 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2018g00081 | Pral-Chr2018 | 387190 | 390402 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2018g00081 | 30 | 378 | G2-like Transcription Factor Family | AT3G04450 | 42.973 | 5.05e-76 | 241 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Pral2018g00081 | Myb_DNA-binding | 7.9e-09 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2018g00081 | - | - | pcin:129312811 | 718.383 |