Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00080 ATGTCTTCATCTTTTCCTCTTCTTCCCACTCGTATTGAAGACAAATATATGAAACCTCTAGATTCTTTTTCCTTGACTGCAGGAGACCTGACTGCAAATCCTGCCTCAGTACAGGCTGCTTCATCAGACTCCAACATTAAAAGCGGTGGGCACATGTTTTCATCACCTTCTAAATGCCTGAATGGCATCGCTTTTTCTTCCTCAATTTCTCAACATGATAGGCAGCATCAAAATTCTCCCTTCATTTCTAAGACATTGAGAAGAGACGATGTAATGCCCCCGCAAGGAACTTCCCTTACTCAGAGTGGGGAAGATGCGTCTTTCCCACCTTCACATTCTTGTTATCCGGAAATACACTCGGCAGCATTCGTTTCTCGACCCCCAGAAAGTGATGATATTTCATGGGGACCAGATCCCTTTCAGGATATTCTTAATCTATCTGTAAATGATTCCGTACAGAACGATCAGATGGAAAATAGTTCTTGTTTTATGTCTGATGACAACTCCAAAAAAACTGATTTTGGGGAGTGGGTAGATCAGTTAATGTCAGTCGATGAATCTCCTCATCCAAACTGGAGCCAGCTTCTTGTTGATGATAATGTACCGGATTCGAAATCAGAGGGGACCCACTCCACCAAGCAGCAGGATGCACCATCTGGAGAAGTTAATGCTCCTCCTACTTCAGCAACGAATGCACTACAAAGTAAGCCTAGAATGCGTTGGACTCCAGAACTTCATGAAGCTTTCGTGGAAGCAGTGAATAAGCTTGGTGGTAGTGAGAAGGCTACTCCTAAGGGTGTTTTGAACCTAATGAAAGTTGAGGGTCTTACTATATATCATGTGAAAAGCCATCTGCAGAAGTATAGAACAGCCAGATTCAAGCCCGAATCATCAGGAGCAGGAGCCTCTGAGAAGAAGTCAACGTCAACCAAAGAAATGAAATCTTCAGACTCGACAGCCATGGGGATTACTGAGGCGTTGCGGTTGCAGATGGAACTCCAGAAGCGGCTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGTCTTCAGATGATGTTTGAGAAACAAAGAGAAATGGAGGACGGCAAACACAAGACATTACCCTCCTCCTTAGACGGGCCCACGGTATTAAATTCCCCCGCGATTGAGGGTCAAGAAACATCTGGAATCAGCAGTATCAATGCAACAACCGCGGGCGAAGAATGTTCTGGGGATGCCTGCACAAAGCAAGAGGTGGAAGGAACTAAAGTTACTAATGAAGAAGAGGCGGGGCATGACCAGTTGGGTGCACCGGCCTCCAAACGGGCGAAAAGCAGGTGA 1347 0.4506 MSSSFPLLPTRIEDKYMKPLDSFSLTAGDLTANPASVQAASSDSNIKSGGHMFSSPSKCLNGIAFSSSISQHDRQHQNSPFISKTLRRDDVMPPQGTSLTQSGEDASFPPSHSCYPEIHSAAFVSRPPESDDISWGPDPFQDILNLSVNDSVQNDQMENSSCFMSDDNSKKTDFGEWVDQLMSVDESPHPNWSQLLVDDNVPDSKSEGTHSTKQQDAPSGEVNAPPTSATNALQSKPRMRWTPELHEAFVEAVNKLGGSEKATPKGVLNLMKVEGLTIYHVKSHLQKYRTARFKPESSGAGASEKKSTSTKEMKSSDSTAMGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEKQREMEDGKHKTLPSSLDGPTVLNSPAIEGQETSGISSINATTAGEECSGDACTKQEVEGTKVTNEEEAGHDQLGAPASKRAKSR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00080 448 Gene3D - 235 294 - -
Pral2018g00080 448 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 233 293 IPR017930 -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 366 448 - -
Pral2018g00080 448 NCBIfam myb-like DNA-binding domain, SHAQKYF class 236 290 IPR006447 GO:0003677
Pral2018g00080 448 Pfam MYB-CC type transfactor, LHEQLE motif 321 367 IPR025756 -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 290 319 - -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 69 109 - -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 188 238 - -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 94 108 - -
Pral2018g00080 448 SUPERFAMILY Homeodomain-like 234 290 IPR009057 -
Pral2018g00080 448 FunFam Myb family transcription factor 235 293 - -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 69 84 - -
Pral2018g00080 448 Coils Coil 324 344 - -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 211 237 - -
Pral2018g00080 448 Pfam Myb-like DNA-binding domain 238 289 IPR001005 -
Pral2018g00080 448 MobiDBLite consensus disorder prediction 380 412 - -
Pral2018g00080 448 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 227 419 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00080 Pral-Chr2018 387190 390402 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00080 30 379 G2-like Transcription Factor Family AT3G04450 42.703 1.09e-74 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral2018g00080 Myb_DNA-binding 7.9e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00080 - - pcin:129312811 724.931