Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral2018g00075 | ATGACGAGGACTCCTTGTTGTGAGAAAATGGGATTGAAGAAGGGACCGTGGACTCCTGAAGAAGATCAGATTTTGATCTCTTACATCCAACGATATGGGCATGGAAACTGGCGGGCTCTTCCTAAACAGGCTGGTTTATTGAGGTGTGGGAAAAGTTGCAGGCTTCGTTGGATAAATTACTTGAGACCTGATATAAAACGAGGGAAATTCAGCAAGGAAGAAGAAGAAACCATCCTCAAACTGCATCAAATTCTTGGAAATAGATGGTCTGCTATTGCGGCGAGATTGCCAGGACGAACAGATAATGAAATAAAGAATTTTTGGCACACCCACCTGAAGAAGAGGCTGGAAAGATGCGAAGTGCGTAAAGTAAGTGCGCCCTCCTCTTGGACACAAGCATCTTCGAGCAAAGGGGTCGTGATGCTACCTATGCCACAGTTAGCAGTAGCAGCCTCGGAATCATCAAGTTCTGCTGATCTTGGCTTCACTGGCAAAGTTCTGATGAGTGCTAATGAGGGTTTAGCGTCAAGGAAATATGCGGCCACGGTGGATTCAGGATTTCATGGCGCACATTCTGGTGATGCATCTGGGGAAACCCTAGGCGGCCATAGATCTAACAACATCAGTGAAGAAATGGAATTTTGGTATGATCTATTCATGAAAGCCGGACAGCCGCCGCAAGTGCATGCAAATCTCGGACAGATTGCATGA | 711 | 0.4627 | MTRTPCCEKMGLKKGPWTPEEDQILISYIQRYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILKLHQILGNRWSAIAARLPGRTDNEIKNFWHTHLKKRLERCEVRKVSAPSSWTQASSSKGVVMLPMPQLAVAASESSSSADLGFTGKVLMSANEGLASRKYAATVDSGFHGAHSGDASGETLGGHRSNNISEEMEFWYDLFMKAGQPPQVHANLGQIA | 236 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral2018g00075 | 236 | CDD | SANT | 69 | 112 | IPR001005 | - | |
Pral2018g00075 | 236 | FunFam | MYB-related transcription factor | 13 | 66 | - | - | |
Pral2018g00075 | 236 | Gene3D | - | 13 | 66 | - | - | |
Pral2018g00075 | 236 | CDD | SANT | 16 | 61 | IPR001005 | - | |
Pral2018g00075 | 236 | FunFam | MYB transcription factor | 69 | 116 | - | - | |
Pral2018g00075 | 236 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
Pral2018g00075 | 236 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
Pral2018g00075 | 236 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
Pral2018g00075 | 236 | SUPERFAMILY | Homeodomain-like | 10 | 108 | IPR009057 | - | |
Pral2018g00075 | 236 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
Pral2018g00075 | 236 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
Pral2018g00075 | 236 | SMART | sant | 66 | 114 | IPR001005 | - | |
Pral2018g00075 | 236 | SMART | sant | 13 | 63 | IPR001005 | - | |
Pral2018g00075 | 236 | Gene3D | - | 69 | 116 | - | - | |
Pral2018g00075 | 236 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
Pral2018g00075 | 236 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 150 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral2018g00075 | Pral-Chr2018 | 361500 | 362855 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral2018g00075 | 1 | 219 | MYB Transcription Factor Family | AT2G31180 | 51.037 | 1.18e-75 | 227 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Pral2018g00075 | Myb_DNA-binding | 1.6e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral2018g00075 | K09422 | - | gmx:102663040 | 282.722 |