Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00064 ATGGAGGAGATCCTTCGCAACAACCACTACCAACTGTGCGATGAGATCGGACGTGGCCGATTCGGCACCATCTTCCGCTGCATTCACCTCCTCTCCGATCGATTCTTTGCCTGCAAACTCATCGACAAGCGCCTCCTCTCCGATCCCACCGATCGCTCTTGTCTCCACAACGAACCCAAGTACATGTCTCTCCTCTCTCCTCACCCCAACATTCTTCAGATCTTCCACGTCTTCCACCACGATCACTTTCTCTCCATCGTCCTTGAGCTCTGCCACCCCCACACCCTCCTCGACCGCATCGTTGCTCGCCCCTTCCCTGAGGCCGAAGCCGCTTCTATCATGAAGCAACTGCTCGAAGCCCTCGCCCACTGCCACCGTCTTGGCATAGCGCACAGAGACATCAAGCCCGACAATCTCTTGTTTGATTCTGGTAATAATCTCAAGGTTGCCGACTTTGGGTCCGCACAGTGGTTCGGCGACGGTAGAAGCATGAGTGGAGTGGTCGGGACGCCTTACTATGTGGCGCCGGAGGTATTAATGGGGAGAGAATACAATGAGAAAGTAGATGTGTGGAGCAGCGGCGTGATTTTGTACATAATGTTGGCCGGATTTCCTCCTTTCCACGGGGAGTCGGCCGCCGATATCTTTGAGGCCGTGGTCAGGGCCAATCTGAGGTTCCCTTCCAGGACTTTCGGGTCCGTCTCTCCTGCTGCCAAGGATCTACTCAGGAAGATGATCTGTAGGGATGTTTCAAGGAGATTATCGGCAGAGCAAGCCTTGGGGCATCCGTGGATCCAGAGCGGAGGGGAGAAAACGGATCTGACGTGA 828 0.5495 MEEILRNNHYQLCDEIGRGRFGTIFRCIHLLSDRFFACKLIDKRLLSDPTDRSCLHNEPKYMSLLSPHPNILQIFHVFHHDHFLSIVLELCHPHTLLDRIVARPFPEAEAASIMKQLLEALAHCHRLGIAHRDIKPDNLLFDSGNNLKVADFGSAQWFGDGRSMSGVVGTPYYVAPEVLMGREYNEKVDVWSSGVILYIMLAGFPPFHGESAADIFEAVVRANLRFPSRTFGSVSPAAKDLLRKMICRDVSRRLSAEQALGHPWIQSGGEKTDLT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00064 275 FunFam Phosphoenolpyruvate carboxylase kinase 2 1 275 - -
Pral2018g00064 275 ProSiteProfiles Protein kinase domain profile. 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00064 275 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Pral2018g00064 275 SMART serkin_6 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00064 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Pral2018g00064 275 CDD STKc_CAMK 9 264 - -
Pral2018g00064 275 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00064 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 8 270 - -
Pral2018g00064 275 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Pral2018g00064 275 SUPERFAMILY Protein kinase-like (PK-like) 5 267 IPR011009 -
Pral2018g00064 275 Gene3D Transferase(Phosphotransferase) domain 1 94 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00064 Pral-Chr2018 309469 310900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00064 10 273 EF-hand Containing Proteins AT1G50700 39.925 3.40e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pral2018g00064 Pkinase 7.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00064 - K08794 pcin:129307338 520.776