Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00043 ATGGCTGAACAAAACCCAGCCGAGTCATTGAGGATGAGATTCAATATGTCGAGGCCTTTTTCTCGGGAGGGAAAAAATCTCGCCGGCAATGGGAATTGGACAGCTAATGAAGTAAGGACAAAGGGAAATACTGTAAATAAGAAGGTCGGTGATTTCATGAGGGAAGTAGAAGGGGCGGGCGATGGGTGCGAGGTGTTTGGGCCGCCTGGCAAAGGAGTTACGTTGGATATGACTCCTCCTCCATTCCTCCTCATTCTGATAACATTCCTGCTCTTGCGAAACTCCTCGTCTCGTGTCGCAGCTCAATGCGGGCTCAATCTGAGTGCCTACCCTTATGTGGGATACGCGGAGTGCGGTTGGGTTCAGGATCAGATGGATCACTGGGACGGCTTCCCAAACACCCTCTGCTGCCGCAACGCCCTCACCGTCTTCTCCCAAGCACTGGCCCTCCGAGCCCGCACCCAGACCTCCCTCTTCATCCCCGACACTGAATGGCACTCCTGTTCCGACGCCTTTCGTCCTTCACAAGCCATTTCTCCAGACTCCTGCGGCTTCCACAACTTGTACCTTGGCGCCTTCAAATGCTCCAACCTCAAACTCTCCGACATTCAGAGCCTCCCGTTCTACCAACCCTCCCTCGACCAATGCTCCCACTTTGACCGTCCCTCTCCCGATTCTTGTGCCCACTGCGTCTCCGCCGTCTTGAATATCCGAGACTCTCTCTACGACCAATTAGTCGGCTCGCAGGACATTCCCGTCGAAAGAGCCGTTTGTGGCGTCGCCTCTCTTGTTTCCCTCGCTGCGGGCAAACCCGACGATCCTTCCCTTTCAGACAAGTTCTTGCGTTGTTGGCCTCCTCCCCCGAACCACGTAAAATCAAACTCGGTCGAGTTACATGCTATATTCATGTTAGTTATTGCTCTGTTAGCGGTGATTGCGATGGCCTTGACGGCAATACTGGTGAGATGTGTGTGGCAGAAGAAGCCTCGAGAAGCGGCGGCGTTGAAAGAAATAACGACGTGGTCAGGGATGTACTGGTTCTCGAAAGCAGAGATAGAGAATGCCATAAGCCACGGGAATGAAAGGAAGTGCCTGGGAAGAGGGAGTGCAGGACAGGTGTTCAAAGGGGTTCTTCCCAGCGGTCAAGTGGTGGCCATCAAGCACCTGAACAAAACTAACAGCTCTGATTCTTTCACTCGCGAAGTGGAAGGCCTTTCCAGGCTTCGCCATCCCAATCTGGTTTGCCTCTTCGGGTGTTGCATTGAAGATGGAGAGAGATATTTAGTGTATGAGTACTGTGCACAAGGCAATCTAGCGCAACATCTCTTGAGAAGAGACAGTCATTTGACATGGGAAACAAGAGTTAGGATTTTAAGGGACTGCTCCTTCGCTCTCAAATATCTGCACAATCATATTGAGGGTTGCGTTGTCCACAGAGATATCAAGCTGACAAACATACTATTGACTGAGAGTTTGCAAGCTAAACTGTCGGATTTTGGGTTGGCAAAGATGCTGGGGATGGAAGAGAGCAAAGTGTTTACGGATGTAAGAGGAACCATAGGGTATATGGATCCAGAGTACATGAGCAATGCCAAGTTAACATGTGCCAGTGACGTCTATAGTTTTGGAATAGTTGCCTTGCAAATTCTATCGGGTCAGAAGGTGATAGAATTAGATCTTGATGCCAGAGATCAACTCACTAGGAAGGCGAGAGACGCGAGCTCCCAAAAACGGCCAATATCGGATTTTGAAGACCCAAGGCTGAGGGGGCAAGTAAACATGGCAGACTTTGAGGCCATCTTGCGTATTGCAGTTCTGTGTGTTGCCAAATCGAGCAAAGGTCGCCCAACCATTGAGGAGGTGTTCGAGGAATTGGATAAGGCCTATAAGAACACTCTTGCCCAATCGAAAGCAAAGCAAGATGAGAGCAAATCCGGAACATCCGACTTGATTATTACTTGA 1962 0.5025 MAEQNPAESLRMRFNMSRPFSREGKNLAGNGNWTANEVRTKGNTVNKKVGDFMREVEGAGDGCEVFGPPGKGVTLDMTPPPFLLILITFLLLRNSSSRVAAQCGLNLSAYPYVGYAECGWVQDQMDHWDGFPNTLCCRNALTVFSQALALRARTQTSLFIPDTEWHSCSDAFRPSQAISPDSCGFHNLYLGAFKCSNLKLSDIQSLPFYQPSLDQCSHFDRPSPDSCAHCVSAVLNIRDSLYDQLVGSQDIPVERAVCGVASLVSLAAGKPDDPSLSDKFLRCWPPPPNHVKSNSVELHAIFMLVIALLAVIAMALTAILVRCVWQKKPREAAALKEITTWSGMYWFSKAEIENAISHGNERKCLGRGSAGQVFKGVLPSGQVVAIKHLNKTNSSDSFTREVEGLSRLRHPNLVCLFGCCIEDGERYLVYEYCAQGNLAQHLLRRDSHLTWETRVRILRDCSFALKYLHNHIEGCVVHRDIKLTNILLTESLQAKLSDFGLAKMLGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDASSQKRPISDFEDPRLRGQVNMADFEAILRIAVLCVAKSSKGRPTIEEVFEELDKAYKNTLAQSKAKQDESKSGTSDLIIT 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00043 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Pral2018g00043 653 ProSiteProfiles Protein kinase domain profile. 359 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00043 653 FunFam Cysteine-rich receptor-like protein kinase 40 332 432 - -
Pral2018g00043 653 SUPERFAMILY Protein kinase-like (PK-like) 338 625 IPR011009 -
Pral2018g00043 653 Pfam SPARK 100 241 IPR043891 -
Pral2018g00043 653 SMART serkin_6 359 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00043 653 Gene3D Phosphorylase Kinase; domain 1 331 432 - -
Pral2018g00043 653 Gene3D Transferase(Phosphotransferase) domain 1 434 651 - -
Pral2018g00043 653 Pfam Protein kinase domain 362 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00043 653 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 274 628 - -
Pral2018g00043 653 MobiDBLite consensus disorder prediction 633 653 - -
Pral2018g00043 653 FunFam probable receptor-like protein kinase At5g59700 433 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00043 Pral-Chr2018 203182 205925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00043 305 631 Receptor kinase-like Gene Family AT1G79620 33.815 8.00e-55 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pral2018g00043 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00043 - - gmx:100790391 718.768