Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00034 ATGGGAGAAGGCGCAGAGTTTCACGACTTTCGTGGATCGCCGGATAAACGGAGCATCGCAGAGAGAAGGGGCTTCGGCTCCGGTGCCGGCAGAATCAATACGCCCTGCTTTCGCACCGCTAGCCCACTTGCTTCGCCGGCAGTTCTTTCCCCCCGTGTCACTATACCCCCCGGTATTAGTCCCACGGCCTTGCTTGACTCTCCCATCATGCTTCCTAATTCTCAGGCAATGCCATCTCCCACCACCGGAAATTTTCTGCTGCCTCCTCTCACTCAGCAGGGATCACTTTTCACTTCCGCCCCTCTCGATGCTGGCCCTGGCTTCGCTTCCTCTGCCAATGTCAAGCCCCAAATCAATGCCAACCCTTTTCCTGCCTCCTCTGTTTCCGAAATTCAGGTCTCTAACCATTGCATTATGGCAAAGGGAGGAATTTCAGATTGCCAGCCAATTGTGCCTGATACAACACTGGATTTTTCAATTCCAGCAGAGTTTCCGAAAGGACATAAAGTGAAAAGTGACGTACATTCTTATGATGATGTGAAAATTATACAAGATGCAGCTTATGACGCTAACAATCTTGAGATGCAAATGCGTCGTTCTGAGGAAGTTGCTGACAAAAGCTTTCTACCTAGAAAAGCTAACAAGGATGTTGGACAGGATAATCTTACAGAAGACAAGAGAGATGCATCCTATTTGGTGGGAATGGTAAGGACCTCAGAGGATGGATACAATTGGAGAAAATATGGACAGAAGCAGGTTAAAGGTAGTGAATATCCTAGGAGCTATTATAAATGTACCCATCCTAACTGTCAGGTCAAGAAAAAGGTGGAACGATCTCTTGATGGCCAAATAACTGAGATTATCTACAAGGGTACTCATAATCATGGGAAACCTCAACCTAGTCGCCGACCATCACTGGGCACAGCACTTTCTACTGATGAGGTGTTAGACGGGGAAGGTGGCCGAAACTTTGTTAAAGCTGACGGTGGTTGGAGGAACATTCACTCAGGGATGAAGGATATAAAACAAAATTTGGATTGGAAGGCTGATAATCAGGAAAGGACATCATCAACTTCTGTTGTAACCGAACTCTCAGATCTCGTATCAACTAACAAGGGTAAACCTATCAACATGTTTGAGTCAGAGGACACTCCAGAGCTTTCTTCTACACTTGCTAGTCAAGATGATGATGAAGAAGGAGCAACTCAAGGAAGCATATCACTTGAAGAGGATGCAGATGATGAAGAACCTGAGTCAAAAAGTAGGAAGAAAGAGAGCTGCTTGATTGAATCAAATTTTGCTTCTAGGGCTGTCCGTGAGCCAAGGGTAGTTGTCCAAATTGAGAGTGAGGTGGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAAGTTGTCAAAGGAAATCCAAACCCTAGGGCAGCTGCTTAA 1437 0.4593 MGEGAEFHDFRGSPDKRSIAERRGFGSGAGRINTPCFRTASPLASPAVLSPRVTIPPGISPTALLDSPIMLPNSQAMPSPTTGNFLLPPLTQQGSLFTSAPLDAGPGFASSANVKPQINANPFPASSVSEIQVSNHCIMAKGGISDCQPIVPDTTLDFSIPAEFPKGHKVKSDVHSYDDVKIIQDAAYDANNLEMQMRRSEEVADKSFLPRKANKDVGQDNLTEDKRDASYLVGMVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLDGQITEIIYKGTHNHGKPQPSRRPSLGTALSTDEVLDGEGGRNFVKADGGWRNIHSGMKDIKQNLDWKADNQERTSSTSVVTELSDLVSTNKGKPINMFESEDTPELSSTLASQDDDEEGATQGSISLEEDADDEEPESKSRKKESCLIESNFASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRAAA 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00034 478 MobiDBLite consensus disorder prediction 1 22 - -
Pral2018g00034 478 MobiDBLite consensus disorder prediction 1 27 - -
Pral2018g00034 478 Gene3D WRKY domain 441 478 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 MobiDBLite consensus disorder prediction 371 431 - -
Pral2018g00034 478 Pfam WRKY DNA -binding domain 240 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 Pfam WRKY DNA -binding domain 455 475 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 SUPERFAMILY WRKY DNA-binding domain 237 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 Gene3D WRKY domain 232 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 ProSiteProfiles WRKY domain profile. 449 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 SMART WRKY_cls 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 SMART WRKY_cls 454 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 MobiDBLite consensus disorder prediction 371 401 - -
Pral2018g00034 478 FunFam WRKY transcription factor 226 299 - -
Pral2018g00034 478 SUPERFAMILY WRKY DNA-binding domain 447 476 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00034 478 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 189 475 IPR044810 GO:0003700
Pral2018g00034 478 ProSiteProfiles WRKY domain profile. 234 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00034 Pral-Chr2018 168429 172229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00034 41 476 WRKY Transcription Factor Family AT4G26640 36.674 1.60e-66 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2018g00034 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00034 K18835 - qsa:O6P43_011330 535.413