Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00032 ATGGGAGAAGGCGCAGAGTTTCACGACTTTCGTGGATCGCCGGATAAACGGAGCATCGCAGAGAGAAGGGGCTTCGGCTCCGGTGCCGGCAGAATCAATACGCCCTGCTTTCGCACCGCTAGCCCACTTGCTTCGCCGGCAGTTCTTTCCCCCCGTGTCACTATACCCCCCGGTATTAGTCCCACGGCCTTGCTTGACTCTCCCATCATGCTTCCTAATTCTCAGGCAATGCCATCTCCCACCACCGGAAATTTTCTGCTGCCTCCTCTCACTCAGCAGGGATCACTTTTCACTTCCGCCCCTCTCGATGCTGGCCCTGGCTTCGCTTCCTCTGCCAATGTCAAGCCCCAAATCAATGCCAACCCTTTTCCTGCCTCCTCTGTTTCCGAAATTCAGGTCTCTAACCATTGCATTATGGCAAAGGGAGGAATTTCAGATTGCCAGCCAATTGTGCCTGATACAACACTGGATTTTTCAATTCCAGCAGAGTTTCCGAAAGGACATAAAGTGAAAAGTGACGTACATTCTTATGATGATGTGAAAATTATACAAGATGCAGCTTATGACGCTAACAATCTTGAGATGCAAATGCGTCGTTCTGAGGAAGTTGCTGACAAAAGCTTTCTACCTAGAAAAGCTAACAAGGATGTTGGACAGGATAATCTTACAGAAGACAAGAGAGATGCATCCTATTTGGTGGGAATGGTAAGGACCTCAGAGGATGGATACAATTGGAGAAAATATGGACAGAAGCAGGTTAAAGGTAGTGAATATCCTAGGAGCTATTATAAATGTACCCATCCTAACTGTCAGGTCAAGAAAAAGGTGGAACGATCTCTTGATGGCCAAATAACTGAGATTATCTACAAGGGTACTCATAATCATGGGAAACCTCAACCTAGTCGCCGACCATCACTGGGCACAGCACTTTCTACTGATGAGGTGTTAGACGGGGAAGGTGGCCGAAACTTTGTTAAAGCTGACGGTGGTTGGAGGAACATTCACTCAGGGATGAAGGATATAAAACAAAATTTGGATTGGAAGGCTGATAATCAGGAAAGGACATCATCAACTTCTGTTGTAACCGAACTCTCAGATCTCGTATCAACTAACAAGGGTAAACCTATCAACATGTTTGAGTCAGAGGACACTCCAGAGCTTTCTTCTACACTTGCTAGTCAAGATGATGATGAAGAAGGAGCAACTCAAGGAAGCATATCACTTGAAGAGGATGCAGATGATGAAGAACCTGAGTCAAAAAGGAAGAAAGAGAGCTGCTTGATTGAATCAAATTTTGCTTCTAGGGCTGTCCGTGAGCCAAGGGTAGTTGTCCAAATTGAGAGTGAGGTGGACATACTTGATGATGGTTATCGCTGGCGAAAGTATGGACAGAAAGTTGTCAAAGGAAATCCAAACCCTAGGAGCTACTACAAATGCACAAGTGCTGGGTGTCTTGTGAGGAAACATGTGGAAAGGGCTTCACACGATCTCAAATTTGTAATAACTGCTTATGAGGGTAAACACAACCATGAAGTGCCCACCGCCAGAAGCAGCAATCAAATGAGCTCGAGTGGTGCCTGTATGCTTTCAAGTGCAGCCACTACACAAGCGGCTCTTGCACCACCTGGGAGTGTCAGTATTCGAAAGCCGGAAAATCAAGTTCAAAACACTGCATCTCATTTTGATAGGAAGCCCGGTTTTATTGGAGGTTTCGGCGATGCGATGAAATTCGGGTCTTCCTCCTTATGTCAGATGAAGTATACTCCCTTGAGCAATACCTTGACTTACGGCTCTTGTGCTACTGCTCAACCCTGTTCTATGACCTCTGTGTTCCCTGACTTTCCAGTGTCACTACCGTTGAACCTTCCCTCATCTGGAGGTTTTCCTCCGGCTGGACTCAATCTCAATTGTGCAAGACCTGTGTCTTTTCTTTCAGGGCAGCTGCTTAAGGAGGTCGATACAGGTTTCCTGAGGCCTAAACAGGAGCATGAAGATGCTATTATCTATGATGCCTGCATGCCCATCGCTGATCATGCCACTGCTTCCCTCACTCCATCGTCGACATCCACTTCAGTGTATAATCGGGTCGTGCACGGTTTCCCTCCATAA 2109 0.4661 MGEGAEFHDFRGSPDKRSIAERRGFGSGAGRINTPCFRTASPLASPAVLSPRVTIPPGISPTALLDSPIMLPNSQAMPSPTTGNFLLPPLTQQGSLFTSAPLDAGPGFASSANVKPQINANPFPASSVSEIQVSNHCIMAKGGISDCQPIVPDTTLDFSIPAEFPKGHKVKSDVHSYDDVKIIQDAAYDANNLEMQMRRSEEVADKSFLPRKANKDVGQDNLTEDKRDASYLVGMVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSLDGQITEIIYKGTHNHGKPQPSRRPSLGTALSTDEVLDGEGGRNFVKADGGWRNIHSGMKDIKQNLDWKADNQERTSSTSVVTELSDLVSTNKGKPINMFESEDTPELSSTLASQDDDEEGATQGSISLEEDADDEEPESKRKKESCLIESNFASRAVREPRVVVQIESEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCLVRKHVERASHDLKFVITAYEGKHNHEVPTARSSNQMSSSGACMLSSAATTQAALAPPGSVSIRKPENQVQNTASHFDRKPGFIGGFGDAMKFGSSSLCQMKYTPLSNTLTYGSCATAQPCSMTSVFPDFPVSLPLNLPSSGGFPPAGLNLNCARPVSFLSGQLLKEVDTGFLRPKQEHEDAIIYDACMPIADHATASLTPSSTSTSVYNRVVHGFPP 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00032 702 SMART WRKY_cls 239 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 SMART WRKY_cls 453 512 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 MobiDBLite consensus disorder prediction 1 22 - -
Pral2018g00032 702 MobiDBLite consensus disorder prediction 1 27 - -
Pral2018g00032 702 Pfam WRKY DNA -binding domain 454 511 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 Pfam WRKY DNA -binding domain 240 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 Gene3D WRKY domain 440 506 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 ProSiteProfiles WRKY domain profile. 448 513 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 FunFam WRKY transcription factor 227 299 - -
Pral2018g00032 702 Gene3D WRKY domain 232 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 192 537 IPR044810 GO:0003700
Pral2018g00032 702 MobiDBLite consensus disorder prediction 371 401 - -
Pral2018g00032 702 SUPERFAMILY WRKY DNA-binding domain 446 513 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 FunFam WRKY transcription factor 33 440 506 - -
Pral2018g00032 702 SUPERFAMILY WRKY DNA-binding domain 237 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral2018g00032 702 MobiDBLite consensus disorder prediction 371 425 - -
Pral2018g00032 702 ProSiteProfiles WRKY domain profile. 234 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00032 Pral-Chr2018 168035 172229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00032 452 556 WRKY Transcription Factor Family AT4G26640 40.187 9.32e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral2018g00032 WRKY 5.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00032 K18835 - qsa:O6P43_007761 789.26