Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00031 ATGGAGGATGGACGTGATCGCCCCATTCTGCTTCCGCCGCCCAATTTCTCGATGGTCGAGGACAACATTTTTCGATCCAGTTTTCCTCGACCTCCCCATTTCCCCTTCCTTCAAACCCTAAATCTTCGATCTATCATATACTTGTGTCCTGAACCATATCCGCAGGAAAATGTGGAATTTCTTCGGTCACAGGACATTCGACTCTTTCAGTTTGGAATCGAGGGAAAGACGGAGGTTTCAGTACCGATTCTGAAGGATACTGTCATGGATGCTCTGAAAGTCTTACTTGATGTGAGAAATCACCCTCTTTTAATCCATTGCAAACAAGGAAAGCATCGAACAGGTTGCCTGGTGGGTTGCTTGAGAAAATTGCAGAAGTGGTGTTTGTCTTCAGTGTTTGAGGAGTACAACAGATTTGCTGGTGCCAAATCGAGGATGGCGGATTTAAGATTCATAGAATCGTTTGATATATTATGCCTGAGGCATTGCCTTTACAGTATTATATACCAGTACCAAGGATATAATTCAACCAAGAGGCGGTTGTTGTATAAAGAAGAGAATTTACAGAAGCCCCAAATGACATCCGTATAG 591 0.4332 MEDGRDRPILLPPPNFSMVEDNIFRSSFPRPPHFPFLQTLNLRSIIYLCPEPYPQENVEFLRSQDIRLFQFGIEGKTEVSVPILKDTVMDALKVLLDVRNHPLLIHCKQGKHRTGCLVGCLRKLQKWCLSSVFEEYNRFAGAKSRMADLRFIESFDILCLRHCLYSIIYQYQGYNSTKRRLLYKEENLQKPQMTSV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00031 196 ProSitePatterns Tyrosine specific protein phosphatases active site. 105 115 IPR016130 GO:0016311|GO:0016791
Pral2018g00031 196 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 11 156 IPR029021 -
Pral2018g00031 196 ProSiteProfiles Dual specificity protein phosphatase domain profile. 15 180 IPR020422 GO:0006470|GO:0008138
Pral2018g00031 196 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 169 - -
Pral2018g00031 196 FunFam probable tyrosine-protein phosphatase At1g05000 9 159 - -
Pral2018g00031 196 Gene3D Protein tyrosine phosphatase superfamily 9 159 IPR029021 -
Pral2018g00031 196 CDD PFA-DSP_Siw14 10 156 - -
Pral2018g00031 196 PRINTS Plant and fungal dual specificity phosphatase signature 47 60 IPR020428 GO:0016791
Pral2018g00031 196 PRINTS Plant and fungal dual specificity phosphatase signature 10 27 IPR020428 GO:0016791
Pral2018g00031 196 PRINTS Plant and fungal dual specificity phosphatase signature 66 80 IPR020428 GO:0016791
Pral2018g00031 196 PRINTS Plant and fungal dual specificity phosphatase signature 83 97 IPR020428 GO:0016791
Pral2018g00031 196 Pfam Tyrosine phosphatase family 10 157 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2018g00031 Pral-Chr2018 162203 164332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2018g00031 3 192 Protein tyrosine phosphatase (PTP) family AT3G02800 67.368 5.48e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00031 K18045 - qsa:O6P43_007759 315.849