Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2018g00023 ATGTTCAAATTCTTGAAAGAGGTGGTGGGTGGATCTGGAACCGGACTCAAAGATCTCCCGTATAATATCGGCCAACCTTACCCTTCGGCTTGGGGATCTTGGACTCACTACCGCGGCACCTCCAAGGATGATGGATCTCCAGTTTCAATCTTTTCTCTATCTGGGAGTAATGCTCAGGATGGACATTTAGCAGCTGGTCGAAATGGAGTCAAGCGTCTCCGAACAGTCAGGCATCCAAATATTTTGTCATTTCTTCACAGTACTGAGACTGAAACGTCTGATGGTGGTTCTGCCAAGGTCACAATCTATATTGTGACTGAGCCTGTCATGCCACTTTCTGAAAAGATTAAGGAGTTAGGACTAGAAGGTACACAAAGGGACGAATACTATGCCTGGGGGCTGCATCAAATAGCCAAGGCTGTGAGCTTCTTAAATAATGATTGCAAACTCATTCATGGTAATGTTTGCTTGGCTAGTGTTGTGGTCACACAGACTTTGGACTGGAAACTCCATGCTTTTGATGTTCTTTCAGAATTTAATGGGAGCAGTGAAGCTTCTGCTGGGCAAATGCTGCAATATGCATGGCTTGTCGGATCACAATACAAACCAATGGAGTTGGCAAAGTCTGATTGGGCTGCTATCAGAAAGTCTCCTCCATGGGCCATTGATTCTTGGGGCATGGGTTGTCTTATCTATGAGCTATTCTCGGGTGTCAGTTTGGGCAAAACAGAGGAGTTGCGCAACACTGCCTCCATTCCCAAGTCTCTGCTTCCAGATTACCAGCGCCTGTTGAGTTCCATGCCATCTCGTAGATTAAATACATCAAAGCTCATAGAAAACAGTGAATATTTTCAAAATAAGTTGGTAGACACAATACATTTCATGGAGATTCTTAGCTTGAAAGACAGCGTTGAGAAAGACACCTTCTTTCGTAAGCTTCCAAATTTAGCAGAGCAACTACCTCGCCAGATTGTGTTGAAGAAGTTGTTACCTTTATTAGCTTCTGCTCTTGAATTTGGTTCAGCTGTTGCCCCTGCTTTGACAGCATTGTTGAAAATGGGTTCCTGGCTTTCAGTTGAGGAGTTCAGTGTCAAGGTGCTTCCAACTATTGTAAAACTCTTTGCCTCCAATGACCGACCTATTCGGGTGGCTCTTCTTCAACATATTGATCAATTTGGTGAGTCCTTATCAGCACAGGTTGTTGATGAGCAGGTTTACCCTCATGTTGCTACTGGGTTTTCTGACACGTCTGCTTTTCTGAGGGAACTGACACTTAAGGCCATGCTTATATTAGCTCCTAAGCTGTCTCAAAGGACCATCTCAGGGTCATTATTAAAATACCTGTCCAAGTTACAGGTTGATGAAGAACCAGCAATTCGAACAAATACAACCATCTTGCTAGGAAATATTGCAAGCTACCTAAATGAAGGGACAAGAAAAAGAGTTTTGATTAATGCATTTACAGTCCGTGCTTTACGGGATACTTTCCCCCCTGCTAGAGGAGCAGGCATAATGGCTTTAAGTGCCACCAGCTCCTATTATGATATACCTGAAATTGCAACCCGGATACTTCCTAATGTTGTAGTACTTACGATTGATCCTGACAGTGATGTTCGGTCCAAAGCATTTCAAGCCGTTGATCAATTTTTGCATATAGTGAAGCAATGTTATGATAAGTCCAATACAACAGATACTACGGGAGCTGTTGGCATGGAAATTTCGTCAGCTTCGGGAAATGCTAGTTTGCTCGGATGGGCTATGAGCTCCTTGACCCTGAAGGGAAAACCTTCTGACCATGCTCCAGTTGCTTCCGCGAGTACAAGCACACTTGCACAAACGTCTTCTAATGCCAGTTCAGTTGTGGACACTCCATCAACAGCACCAGTCCGTGTGAGATCCACCTCTGATTTGGCTGAAATTGCTGTCCCCCCATCGCCTACATCAACAGATGGTTGGGGTGAACTGGAGAATGGAATTGAAGAGCATGAAAATGACAAGGATGGTTGGGATGATTTGGAACCACTCGAAGAGGCAAAACCATCTCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCAGTCTCTCAACCTGTTTCACAGGCAAAACATGCCTCAAGTATGCGACCAAAAAGTGCAACAAAGTTGAGCAGGGATGAGGATGATGATTTGTGGGGTTCCATTGCAGCGCCTGCTCCAAGAACATCAAATTCTTCAGGCGTCAAATCAGTTGCTACTGATGATGATGATCCCTGGGCTGCCATTGCTGCACCAGCACCCACTACTAAAGCGAAGCCCTTATCAGCTAGCAGAGGTCGGGGAGTTAAACCCAGCGCTCCAAAGTTAGGTGCTCAGAGGATAAACCGGACATCATCAGGGGTGTAA 2385 0.4507 MFKFLKEVVGGSGTGLKDLPYNIGQPYPSAWGSWTHYRGTSKDDGSPVSIFSLSGSNAQDGHLAAGRNGVKRLRTVRHPNILSFLHSTETETSDGGSAKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYAWGLHQIAKAVSFLNNDCKLIHGNVCLASVVVTQTLDWKLHAFDVLSEFNGSSEASAGQMLQYAWLVGSQYKPMELAKSDWAAIRKSPPWAIDSWGMGCLIYELFSGVSLGKTEELRNTASIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVEKDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAVAPALTALLKMGSWLSVEEFSVKVLPTIVKLFASNDRPIRVALLQHIDQFGESLSAQVVDEQVYPHVATGFSDTSAFLRELTLKAMLILAPKLSQRTISGSLLKYLSKLQVDEEPAIRTNTTILLGNIASYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALSATSSYYDIPEIATRILPNVVVLTIDPDSDVRSKAFQAVDQFLHIVKQCYDKSNTTDTTGAVGMEISSASGNASLLGWAMSSLTLKGKPSDHAPVASASTSTLAQTSSNASSVVDTPSTAPVRVRSTSDLAEIAVPPSPTSTDGWGELENGIEEHENDKDGWDDLEPLEEAKPSPALANIQAAQRRPVSQPVSQAKHASSMRPKSATKLSRDEDDDLWGSIAAPAPRTSNSSGVKSVATDDDDPWAAIAAPAPTTKAKPLSASRGRGVKPSAPKLGAQRINRTSSGV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2018g00023 794 MobiDBLite consensus disorder prediction 690 712 - -
Pral2018g00023 794 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 9 773 - -
Pral2018g00023 794 Pfam Protein kinase domain 37 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00023 794 MobiDBLite consensus disorder prediction 689 794 - -
Pral2018g00023 794 MobiDBLite consensus disorder prediction 596 655 - -
Pral2018g00023 794 SUPERFAMILY Protein kinase-like (PK-like) 34 287 IPR011009 -
Pral2018g00023 794 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Pral2018g00023 794 SMART serkin_6 37 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00023 794 Gene3D Transferase(Phosphotransferase) domain 1 109 280 - -
Pral2018g00023 794 MobiDBLite consensus disorder prediction 601 632 - -
Pral2018g00023 794 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Pral2018g00023 794 Gene3D - 282 558 IPR011989 -
Pral2018g00023 794 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2018g00023 794 SUPERFAMILY ARM repeat 293 555 IPR016024 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Pral2018g00023 Pkinase 5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2018g00023 K08876 - gmx:100782748 1315.83