LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2018g00005	ATGTGTGGCATATTTGCTTATCTTAACTACAACGTTAACAGAGAAAGGAGGTACATCCTGCAGGTATTATTCAATGGCCTCAGGCGATTGGAATACCGCGGCTATGATTCCGCTGGCATCGCCATCGACTCCACTCTTTCCCTCGATCCAAACACTCCTCAATGCTCGTCAATTTCCATCATTCCTCCTCCCCTTATCTTCCGTCAAGAGGGCAACATCGAATCCCTTGTCAAATCCGTCTACCAAGTTGCTGAAGTGGAATTAAATTTGGAGGAATCTTTCTCCATTCATGCTGGAATAGCGCATACACGATGGGCAACCCACGGAGAGCCTTCTCCCAGGAATAGTCATCCTCAGAGCTCTGGCGCTGGAGATGAATTTTTGGTTGTTCACAATGGGGTTATTACTAATTATGAGGTTTTGAAGCAAACGTTGATCCGCCATGGGTTCACATTTGAATCTGAAACTGACACAGAAGTCATTCCAAAACTTGCAAAGCTTGTTTTCGATAAAGCAAATGAGGTAGAAGGTGATCAAGTTGTTACCTTCAGTCAAATTGTTCTGGAAGTTATGAGGCATCTTGATGGAGCATATGCCCTAATTTTCAAAAGCCGACATTATCCAAATGAGTTAATTGCTTGCAAGCGTGGCAGCCCACTACTTCTAGGTGTAAAAGAATTGACAGAAAATATGGTTGATGGTTCAGCATTTGAGGATAATAACTTTCTATCAAAAAATAGCCACCCCAAAGAGTTGTTTTTATCTAGTGATGCTAATGCGGTGGTAGAACATACAAAGAAGGTCTTGGTTATTGAGGATGGTGAAGTCGTTCACCTCAAGGACGGAGCAGTTTCAATTTTGAAGTTTGAAAATGATAAAGGAAAAAATGGTGGTTTCCTTTCTAGACCTGCTTCAGTGCAACGGGCTTTATCAGTTCTTGAGATGGAGGTTGAGCAAATTAATAAAGGACATTACGAGCATTATATGCAGAAGGAAATTCATGAGCAACCTGAATCTCTTACTACGACAATGAGGGGGAGGCTTATTCGGGGAGGATCGAGCAAATTAAAAACTGTACTATTGGGTGGATTGAAGGATCACCTTAAAACAATCCGACGAAGTAGAAGGATTGTTTTCATTGGTTGTGGTACCAGTTACAATGCAGCTTTGGCAGCTAGACCAATATTGGAAGAACTTTCTGGAATCCCTGTTACCATGGAAATTGCCAGTGATCTGTTGGATCGGCAGGGACCAATATATAGGGAAGATACTGCTGTTTTTGTTAGTCAATCTGGTGAAACTGCAGATACTTTACTTGCACTGCAATATGCTTTAGAGAATGGTGCCTTATGTGTTGGCATAACAAATACCGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTACATATAAATGCTGGTGCTGAGATAGGGGTGGCAAGTACCAAGGCGTACACAAGTCAAATAGTGGTGATGGCTATGTTGGCACTTGCAATAGGAGGTGACACAATTTCTAATCAGGCGAGAAGAGAAGCAATTATCGATGGTCTCTTGGACCTGCCAAATAAAGTCAGGGAGGTGCTGAAAAAAGACCAGGAGATGAAGGATCTGGCAAAGTTGTTAATGTCTGAGCAGTCTCTTCTTGTATTTGGAAGAGGATTTAACTACGCAACAGCTCTGGAGGGAGCTTTGAAAGTAAAGGAAGTGGCTCTTACGCACAGTGAAGGAATACTTGCTGGTGAAATGAAGCATGGTCCTTTGGCATTGGTGGATGAAAATCTTCCAATTATTGTTTTAGCTACTCGTGACGCTTGCTTCAGCAAGCAGCAGTCTGTCATTCAGCAACTTCATGCTCGCAAAGGCCGTCTTATAGTTGTGTGTTCAAAAGGGGACGCTGCTTTGGTGTCTCCTGGTGAATCTTGTAGGGTAATTGAAGTTCCATCTGTCGAAGACTGTCTTCAACCTGTAATTAATATAATTCCGTTACAGTTACTGGCATATCATCTCACTGTACTTAAAGGATTAAATGTTGACCAGCCTCGGAATCTCGCCAAGAGTGTCACAACCCAGTGA	2076	0.4249	MCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDSTLSLDPNTPQCSSISIIPPPLIFRQEGNIESLVKSVYQVAEVELNLEESFSIHAGIAHTRWATHGEPSPRNSHPQSSGAGDEFLVVHNGVITNYEVLKQTLIRHGFTFESETDTEVIPKLAKLVFDKANEVEGDQVVTFSQIVLEVMRHLDGAYALIFKSRHYPNELIACKRGSPLLLGVKELTENMVDGSAFEDNNFLSKNSHPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGAVSILKFENDKGKNGGFLSRPASVQRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLIRGGSSKLKTVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGIPVTMEIASDLLDRQGPIYREDTAVFVSQSGETADTLLALQYALENGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMAMLALAIGGDTISNQARREAIIDGLLDLPNKVREVLKKDQEMKDLAKLLMSEQSLLVFGRGFNYATALEGALKVKEVALTHSEGILAGEMKHGPLALVDENLPIIVLATRDACFSKQQSVIQQLHARKGRLIVVCSKGDAALVSPGESCRVIEVPSVEDCLQPVINIIPLQLLAYHLTVLKGLNVDQPRNLAKSVTTQ	691

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2018g00005	691	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	2	298	IPR029055	-
	Pral2018g00005	691	CDD	SIS_GlmS_GlmD_2	533	689	IPR035490	-
	Pral2018g00005	691	Pfam	Glutamine amidotransferase domain	97	213	-	-
	Pral2018g00005	691	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	2	282	IPR017932	-
	Pral2018g00005	691	FunFam	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2	2	302	-	-
	Pral2018g00005	691	Gene3D	-	323	690	-	-
	Pral2018g00005	691	PANTHER	GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING	1	691	-	-
	Pral2018g00005	691	ProSiteProfiles	SIS domain profile.	367	506	IPR001347	GO:0097367\|GO:1901135
	Pral2018g00005	691	ProSiteProfiles	SIS domain profile.	538	681	IPR001347	GO:0097367\|GO:1901135
	Pral2018g00005	691	FunFam	Glutamine--fructose-6-phosphate aminotransferase [isomerizing]	323	598	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2018g00005	Pral-Chr2018	48336	54517	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2018g00005	100	223	PRT Gene Family	AT2G16570	28.125	6.29e-06	47.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2018g00005	K00820		-	qsu:112012416	1206.43

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