Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2014g00012 ATGGCGAGTAATGGTACTGCAAAGATCCCTATCAATAATGATAATGAAGGTTCAGAAGCCGCCATTGAGATAAAGATTAAAACATTGGACTCACAAATTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAGGAACAAATTGCTTCTGTGACTGGAGTGTTGTCAGAGCGGCAGCGCTTAATTTGCCGAGGAAAAGTTTTGAAGGATGATCAACTCCTTTCTGCCTATCACGTTGAAGATGGTCATACCTTACATCTGGTTGTGAGGCAACCTGATCTACCTGGGAGTTTGCCCAATCAATCAGCTGATCCACATTCAAGCACAAACAATAGTCACAGTAATCAAATAGCTCCTGGCGTTTTTATTGAAACTTTTAATGTGCCTGTTCAGGGAGATGGGGTTCCTCCAGAAGTTAATAGGATTATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTCCAAGTGGTGGTGAAGGGATTGATGTCAGGGGACATGATTCCCGAGGGCTTGGGAGAACATCAGGTTCTAGTGGTATATCAGATTCATTTCATTCTCCACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATTGCGTAATGCATTCGGACTTCCGACGGCAGCTTCCTCTTTGGGATCATTACAGCCTCCTGTCATTCCTGATTCTTTGACAACTTTATCTCAGTACGTGACTCATCTAAGGCATGAATTTGAAGCCATCGCGAGAGAAGGGGGAAATTGTGCCCAAGCAGCTGAAGCTCATAGGAATGAATCATCAATTTCTTCTTCACCTTCAGGTTCTACATCACAAGGGCTTTTGTCACCTGCGTACTTGGCAGAAGTGTTGCATTCTACCAGACGGATGTTCATTGAACAGGCTAATGAGTGCTTACTTCAACTTGCAACACAACTTGAGAATCAAGCAAATGTAACTGATCCCCCGTTGCGGTCAAACACTCAGTCTAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCGTTTTTACTCGAGCTTGGTCGTACGACCATGGCATTACGTTTGGGTCATGCACCGTCTGAAGCTGTAGCTAATGGCGGACCAGCGGTTTTTATATCCTCATCTGGTCCTAACCATATTATGGTTCAGCCTCTTCCTTTTCAACCTGGGGCAAGCTTTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGTCCCTGTTGGAGCCGTGCAGTCCCCTTCTGGTTTAGGTAGCGGACTTGGTTCAAGTTTCTACCCAAGGCGTATAGATATTCAAATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAAGAAAATGGGGATGCACAATCTGCCACAGTACAAAGAAATCCTGTTGAAATTTCTGTTAATCAAACAAGCTCTAGACTTCCAGAGGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCTAGCCACTTAGGTCGCAACCCTTCAGAATCTTCTGCTAATTCTATAGGTCTTTACTATCCTGTTATCGGGAGATTTCAGCATGCACCTTCTGGACATGGGAATAGTGACTCAGGATCTCAGTCTGCAGGTCAGCATCATGCTTCGGGTTTTCATGCAGTGCAACAGTCAACGCCTGAATCTACTGGGCAAAGGCAAAGCATGGATGATCCTGCAAGAAATGGATCTTCATCGATTCCTACCTTAAGACAGGAACCATCTAATACCCGCAGGGTGAACATCAATATTCTGACGGCTGGTGGACTCCAGAACAACCAAGAATCTGAGAGGCAGATACCCAATAATGTACTTCAATTTATAAGAACACTTTTTCCTGGTGGTGAAGTTCATGTTGAAGATTCTAGTTCACAGGGAACGACTGGTGTTCCTACCTCAGATCATGCTGGACCATCAACAGGTGCTGCTCGTGCCCCAGAGTCAGAGCCCAGAGCTAGTGAGGAAGGCCTATTTTTGTCTAACTTGCTACGTGAGGTCATGCCTCTCATATCACAAGCAGGGTCTGGAACGCATGGAACTCCTCAAGGTGAAAATGCTTCAGACAATCAAACAGCTTCTGATTCTTCCACCCAGGTTGGGATGTCACGCAGACAAAGTGATTCTGAGCCAAGCCCTCCAAATCCTAAACGCCAAAAGAGGGAGTGA 2190 0.4548 MASNGTAKIPINNDNEGSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSLPNQSADPHSSTNNSHSNQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGGEGIDVRGHDSRGLGRTSGSSGISDSFHSPPEQAGLRNSSDRLRNAFGLPTAASSLGSLQPPVIPDSLTTLSQYVTHLRHEFEAIAREGGNCAQAAEAHRNESSISSSPSGSTSQGLLSPAYLAEVLHSTRRMFIEQANECLLQLATQLENQANVTDPPLRSNTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGHAPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGASFAPAPAPAPAPVPVGAVQSPSGLGSGLGSSFYPRRIDIQIRRGTSTSSANVNREENGDAQSATVQRNPVEISVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSHLGRNPSESSANSIGLYYPVIGRFQHAPSGHGNSDSGSQSAGQHHASGFHAVQQSTPESTGQRQSMDDPARNGSSSIPTLRQEPSNTRRVNINILTAGGLQNNQESERQIPNNVLQFIRTLFPGGEVHVEDSSSQGTTGVPTSDHAGPSTGAARAPESEPRASEEGLFLSNLLREVMPLISQAGSGTHGTPQGENASDNQTASDSSTQVGMSRRQSDSEPSPPNPKRQKRE 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2014g00012 729 MobiDBLite consensus disorder prediction 164 199 - -
Pral2014g00012 729 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 10 726 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 435 476 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 525 586 - -
Pral2014g00012 729 CDD Ubl_ubiquitin_like 24 91 - -
Pral2014g00012 729 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Pral2014g00012 729 MobiDBLite consensus disorder prediction 175 199 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 258 277 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 678 729 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 625 662 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 98 119 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 435 475 - -
Pral2014g00012 729 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Pral2014g00012 729 Gene3D - 15 119 - -
Pral2014g00012 729 FunFam Large proline-rich protein BAG6 14 107 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 527 586 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 628 643 - -
Pral2014g00012 729 SMART ubq_7 22 93 IPR000626 GO:0005515
Pral2014g00012 729 MobiDBLite consensus disorder prediction 254 277 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 681 720 - -
Pral2014g00012 729 MobiDBLite consensus disorder prediction 94 119 - -
Pral2014g00012 729 SUPERFAMILY Ubiquitin-like 17 101 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2014g00012 Pral-Chr2014 59152 68857 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2014g00012 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 2.84e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2014g00012 K23390 - gmx:100783070 914.835