Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2014g00010 ATGGCGAGTAATGGTACTGCAAAGATCCCTATCAATAATGATAATGAAGGTTCAGAAGCCGCCATTGAGATAAAGATTAAAACATTGGACTCACAAATTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAGGAACAAATTGCTTCTGTGACTGGAGTGTTGTCAGAGCGGCAGCGCTTAATTTGCCGAGGAAAAGTTTTGAAGGATGATCAACTCCTTTCTGCCTATCACGTTGAAGATGGTCATACCTTACATCTGGTTGTGAGGCAACCTGATCTACCTGGGAGTTTGCCCAATCAATCAGCAACTGATCCACATTCAAGCACAAACAATAGTCACAGTAATCAAATAGCTCCTGGCGTTTTTATTGAAACTTTTAATGTGCCTGTTCAGGGAGATGGGGTTCCTCCAGAAGTTAATAGGATTATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTCCAAGTGGTGGTGAAGGGATTGATGTCAGGGGACATGATTCCCGAGGGCTTGGGAGAACATCAGGTTCTAGTGGTATATCAGATTCATTTCATTCTCCACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATTGCGTAATGCATTCGGACTTCCGACGGCAGCTTCCTCTTTGGGATCATTACAGCCTCCTGTCATTCCTGATTCTTTGACAACTTTATCTCAGTACGTGACTCATCTAAGGCATGAATTTGAAGCCATCGCGAGAGAAGGGGGAAATTGTGCCCAAGCAGCTGAAGCTCATAGGAATGAATCATCAATTTCTTCTTCACCTTCAGGTTCTACATCACAAGGGCTTTTGTCACCTGCGTACTTGGCAGAAGTGTTGCATTCTACCAGACGGATGTTCATTGAACAGGCTAATGAGTGCTTACTTCAACTTGCAACACAACTTGAGAATCAAGCAAATGTAACTGATCCCCCGTTGCGGTCAAACACTCAGTCTAGGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCGTTTTTACTCGAGCTTGGTCGTACGACCATGGCATTACGTTTGGGTCATGCACCGTCTGAAGCTGTAGCTAATGGCGGACCAGCGGTTTTTATATCCTCATCTGGTCCTAACCATATTATGGTTCAGCCTCTTCCTTTTCAACCTGGGGCAAGCTTTGCCCCTGCCCCTGCCCCTGCCCCTGCCCCTGTCCCTGTTGGAGCCGTGCAGTCCCCTTCTGGTTTAGGTAGCGGACTTGGTTCAAGTTTCTACCCAAGGCGTATAGATATTCAAATACGGCGAGGTACATCAACATCCTCAGCTAATGTCAACAGAGAAGAAAATGGGGATGCACAATCTGCCACAGTACAAAGAAATCCTGTTGAAATTTCTGTTAATCAAACAAGCTCTAGACTTCCAGAGGATTTATCTTTTGGTGGGGAGTCAGGAGTACGGATAGTGCCAATTAGAACCATGGTTGCAGCAGTACCTAGCCACTTAGGTCGCAACCCTTCAGAATCTTCTGCTAATTCTATAGGTCTTTACTATCCTGTTATCGGGAGATTTCAGCATGCACCTTCTGGACATGGGAATAGTGACTCAGGATCTCAGTCTGCAGGTCAGCATCATGCTTCGGGTTTTCATGCAGTGCAACAGTCAACGCCTGAATCTACTGGGCAAAGGCAAAGCATGGATGATCCTGCAAGAAATGGATCTTCATCGATTCCTACCTTAAGACAGGAACCATCTAATACCCGCAGGGTGAACATCAATATTCTGACGGCTGGTGGACTCCAGAACAACCAAGAATCTGAGAGGCAGATACCCAATAATGTACTTCAATTTATAAGAACACTTTTTCCTGGTGGTGAAGTTCATGTTGAAGATTCTAGTTCACAGGGAACGACTGGTGTTCCTACCTCAGATCATGCTGGACCATCAACAGGTGCTGCTCGTGCCCCAGAGTCAGAGCCCAGAGCTAGTGAGGAAGGCCTATTTTTGTCTAACTTGCTACGTGAGGTCATGCCTCTCATATCACAAGCAGGGTCTGGAACGCATGGAACTCCTCAAGGTGAAAATGCTTCAGACAATCAAACAGCTTCTGATTCTTCCACCCAGGTTGGGATGTCACGCAGACAAAGTGATTCTGAGCCAAGCCCTCCAAATCCTAAACGCCAAAAGAGGGAGTGA 2193 0.4546 MASNGTAKIPINNDNEGSEAAIEIKIKTLDSQIYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLPGSLPNQSATDPHSSTNNSHSNQIAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFPSGGEGIDVRGHDSRGLGRTSGSSGISDSFHSPPEQAGLRNSSDRLRNAFGLPTAASSLGSLQPPVIPDSLTTLSQYVTHLRHEFEAIAREGGNCAQAAEAHRNESSISSSPSGSTSQGLLSPAYLAEVLHSTRRMFIEQANECLLQLATQLENQANVTDPPLRSNTQSRAWRTGVLFYNLGAFLLELGRTTMALRLGHAPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGASFAPAPAPAPAPVPVGAVQSPSGLGSGLGSSFYPRRIDIQIRRGTSTSSANVNREENGDAQSATVQRNPVEISVNQTSSRLPEDLSFGGESGVRIVPIRTMVAAVPSHLGRNPSESSANSIGLYYPVIGRFQHAPSGHGNSDSGSQSAGQHHASGFHAVQQSTPESTGQRQSMDDPARNGSSSIPTLRQEPSNTRRVNINILTAGGLQNNQESERQIPNNVLQFIRTLFPGGEVHVEDSSSQGTTGVPTSDHAGPSTGAARAPESEPRASEEGLFLSNLLREVMPLISQAGSGTHGTPQGENASDNQTASDSSTQVGMSRRQSDSEPSPPNPKRQKRE 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2014g00010 730 Gene3D - 15 120 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 626 663 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 682 721 - -
Pral2014g00010 730 CDD Ubl_ubiquitin_like 24 91 - -
Pral2014g00010 730 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Pral2014g00010 730 MobiDBLite consensus disorder prediction 98 120 - -
Pral2014g00010 730 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Pral2014g00010 730 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 10 727 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 528 587 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 629 644 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 94 120 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 436 477 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 679 730 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 436 476 - -
Pral2014g00010 730 FunFam Large proline-rich protein BAG6 14 107 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 255 278 - -
Pral2014g00010 730 SUPERFAMILY Ubiquitin-like 17 100 IPR029071 -
Pral2014g00010 730 SMART ubq_7 22 93 IPR000626 GO:0005515
Pral2014g00010 730 MobiDBLite consensus disorder prediction 165 200 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 526 587 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 176 200 - -
Pral2014g00010 730 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2014g00010 Pral-Chr2014 59152 68857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2014g00010 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 36.111 2.85e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2014g00010 K23390 - gmx:100783070 921.383