LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2014g00005	ATGGCTGCTTCTCCTTTCCTTCACCCTATCCACAAACTCGAATTCCGAAGATGCTCCTTCGTTGCTTTGAATTCTCAATTCCCTCCTCGTCTCCATTTTCTCCCTCGTCGCTTCCCCTCTTCCTCAACCATCCGTGCAAGCTCCGCTGTTCTTATGGAGTCGGATACAAGTACGCGACAGGATCAAGCAAAGGAAACTGAAATCTTTGCCTGCCCAGTATGTTATGAACCTTTGATAAGAAAAGGTCCTCCTGGACTTAACCTATCAGCAATCTACAGGTCTGGTTTTAAGTGTAGAAGGTGCAATAAGTCATACTCTAGCAAAGACATGTTTCTGGATCTAACTGTCACTGCTGGTTTGAGGGATTACACCGAAGTTCAACCAGTCAGGACTGAGCTTTTCAGGAGTCCACTTGTCTCATTCTTGTACGAGAGAGGCTGGCGTCAAAATTTCAATCGAAGTGGTTTTCCTGGCCGTGATGAAGAGTTCAAAATGGCTCAAGAGTACTTCAAACCTGCTCAGGGTGGTCTTCTTGTTGATGTCAGCTGCGGTAGTGGTTTATTTTCCCGAAAATTTGCCAGCTCTGGAGTCTATTCTGGTGTCATTGCTCTAGATTTTTCTGAAAATATGCTTCGCCAGTGTTACAATTTCATCAAGCAAGATGAAACTCTTTTAGCCAATAATCTTGCTCTGGTAAGGGCAGATGTTTCTAGGCTTCCCTTCTCTTCAGGTTCAGTTGATGCTGTTCATGCTGGTGCAGCCTTGCATTGTTGGCCATCTCCCTCCAATGCTATTGCTGAAATCACCCGCATACTAAAAAGTGGTGGAGTCTTTGTGGGAAGCACTTTTCTTCGTTACACTTCTTCAACTCCCTGGATTATACGGCCTCTCCGAGAGAGAACTCTGCAGGGCTATAGTTATTTGACAGAGGAAGAGATAGAAGACCTTTGCACATCATGTGGTCTCACCAATTACTCCCGCAAAATTCAGCAGTCCTTCATTATGTTTTCTGCTCAGAAACCTTAA	1026	0.4474	MAASPFLHPIHKLEFRRCSFVALNSQFPPRLHFLPRRFPSSSTIRASSAVLMESDTSTRQDQAKETEIFACPVCYEPLIRKGPPGLNLSAIYRSGFKCRRCNKSYSSKDMFLDLTVTAGLRDYTEVQPVRTELFRSPLVSFLYERGWRQNFNRSGFPGRDEEFKMAQEYFKPAQGGLLVDVSCGSGLFSRKFASSGVYSGVIALDFSENMLRQCYNFIKQDETLLANNLALVRADVSRLPFSSGSVDAVHAGAALHCWPSPSNAIAEITRILKSGGVFVGSTFLRYTSSTPWIIRPLRERTLQGYSYLTEEEIEDLCTSCGLTNYSRKIQQSFIMFSAQKP	341

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2014g00005	341	CDD	AdoMet_MTases	178	279	-	-
	Pral2014g00005	341	PANTHER	METHYLTRANSFERASE	88	328	-	-
	Pral2014g00005	341	Gene3D	Vaccinia Virus protein VP39	134	340	IPR029063	-
	Pral2014g00005	341	Pfam	Methyltransferase domain	179	279	IPR013216	GO:0008168
	Pral2014g00005	341	FunFam	Putative methyltransferase, chloroplastic	134	340	-	-
	Pral2014g00005	341	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	142	341	IPR029063	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2014g00005	Pral-Chr2014	26325	30156	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Pral2014g00005		Methyltransf_11	4.1e-20	CL0063

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2014g00005	-		-	pcin:129320859	599.742