Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2006g00006 ATGTATCAGGCAAGCATACGAGAACAACAAATCGACGGCAACAAACACAAAAACGAAGGATGTGAGGAGACAAGAGAGCAGTTCAAGAACCATATTTGTGGAGGATGCAAGAACAGAAGGCCGAGAAAAGGATGTAAGAGGGAATTCACATATGCAGAACTTTATGCAGCAACAGATGGGTTTTCTATGAAGAACTTCCTATCAGAAGGAGGTTGTGGTAAAGTGTACAAGGGGCAGCTTCATGGGATAAAGATTGCTGTGAAGAAACACAAAAACATTGAAAGTAACAAGCAAGGGGACAAGGAGTTCAGGTCCGAGGTTGATGCACTCAGCAGAGTGAGACATGAGAATGTTGTTGTCATGTTGGGATCATGCTCTGAAGGAAATCATAGGCTTCTTGTCTATGAATTTGTCTGCAATTTTTCACTCAACCAGCATTTACACCAACACTGCCGGAGACCTCTGAGTTGGGAGAACAGAGTCAAGGTAGCCATTGGAGCAGCAAGAGGATTACTATATTTGCATGACAACAACATCATTCACAGAGACATGACCCCTAACAACATTCTTCTTACTCATGACTTTGAAACATTGTTGGGAGATTTTGGGCTGGCAATTACAAGGGAAGAAGAGAAAGAGACGGCATCTGAAGAAGAATGTGTAGGAGGAGATGAGGATTATGCGGCACCAGAATATGTTGAAGATGGGAAATTATCCACAAAAACAGATGTTTACTCTTTTGGGGTGGTTCTCTTACAGCTTATTACTGGCATGAGAACTACTGATAAAAGAAGACTTGGAGAAAGAAGCCTTGTGGAATGGGCAAGGCCACTGTTGAGAGAGAGGAAATGTGGGAGTGTGATAGATAAGAGGATAAGGGAAGATCATGACTGCCATCAGTTGTATTGGATGAGTCGTCTTGCCCAGTCATGTCTCTCTAAAAATCCTCACAAGCGTCTAACTATGGCCCAGGTGGTGGAAGCCTTGAGTCACATAGCAGAAGGATGCAAATGCAATGACAAGCAGAAGAAGTGTAGTTCCCCTTACCACTATGATCCATCATCCCTTCTCATCTCTGCTTCTTCTATGACTTAA 1095 0.4301 MYQASIREQQIDGNKHKNEGCEETREQFKNHICGGCKNRRPRKGCKREFTYAELYAATDGFSMKNFLSEGGCGKVYKGQLHGIKIAVKKHKNIESNKQGDKEFRSEVDALSRVRHENVVVMLGSCSEGNHRLLVYEFVCNFSLNQHLHQHCRRPLSWENRVKVAIGAARGLLYLHDNNIIHRDMTPNNILLTHDFETLLGDFGLAITREEEKETASEEECVGGDEDYAAPEYVEDGKLSTKTDVYSFGVVLLQLITGMRTTDKRRLGERSLVEWARPLLRERKCGSVIDKRIREDHDCHQLYWMSRLAQSCLSKNPHKRLTMAQVVEALSHIAEGCKCNDKQKKCSSPYHYDPSSLLISASSMT 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2006g00006 364 SUPERFAMILY Protein kinase-like (PK-like) 44 329 IPR011009 -
Pral2006g00006 364 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 138 344 - -
Pral2006g00006 364 ProSitePatterns Tyrosine protein kinases specific active-site signature. 179 191 IPR008266 GO:0004672|GO:0006468
Pral2006g00006 364 PANTHER OS01G0253100 PROTEIN 27 333 - -
Pral2006g00006 364 Gene3D Phosphorylase Kinase; domain 1 16 137 - -
Pral2006g00006 364 Pfam Protein tyrosine and serine/threonine kinase 63 329 IPR001245 GO:0004672|GO:0006468
Pral2006g00006 364 FunFam Proline-rich receptor-like protein kinase PERK8 23 137 - -
Pral2006g00006 364 Gene3D Transferase(Phosphotransferase) domain 1 139 352 - -
Pral2006g00006 364 ProSiteProfiles Protein kinase domain profile. 61 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2006g00006 Pral-Chr2006 28252 31740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2006g00006 49 347 Trihelix Transcription Factor Family AT5G38560 43.831 7.26e-75 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral2006g00006 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2006g00006 - - gmx:102663919 422.165