Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2006g00005 ATGTCCTTAGAGTCTCAGAGGGTAGTGGTGATCCAGGATGCTTCAAGAGATGTGAGTACAAGTGCAATAAAGAAGGTTCTAAAACAGCTAGCTCTAAAACCTGGAGATGAACTCACAATTCTTGCTATATTTGGGAACAAAATCGTCAAGATGGATTCAAGATCATTTATTGCAACAGATGGGGAAAATCTTCAAGAGGAACTTGGCAAGATAAAGGAAGAATATCATAACAGACCACAAGTCATGAAACTTTCTGAGTATTGTCAAGCAAAAAATCTTGTTTTCCAGATAGAAGTTCTTGCATACCCTTCTCAAGATGTTACTTGTAATGCTGTCAATATGTTTAGGGCTACGTGCTTGATACTTGACAGACATATGAACAAAGATAAGAGGCACTGCATGGACAACCTCGCTTGTGGTATTTATAGGATAAGGAATCGCTATAGCATTCAAATGCTCAGAAAGCCAAAACTAACAGAGAAGAGCAAATCATTTGCTGAAAGATCAGATCACGTGAGAAATATGGAAGTGACACCAGGAAGCTCAGAGGCAGAATTTTCTAATAAGAGAACTAGATCATCATCAAGCGAGAATCTCATGGAAACAGGAGTTTCAATTCTTCAATTTGAGAGTAAAGAGAAAGGACAAACAGAAGAACCTCAATTTGAGATGAAAGAAGAGCTCACAGAACCACTATGTTCAGTGTGCAAGAACGAAAGACCAAAACCTGGATGTATGAGAGACTTCAGTTACTCTGAGCTTTACACAGCCACAAAGGGATTTTCCCAGAAGAATTTTCTATCAGAAGGTGGATTTGGATCAGTGTACAAAGGGCAGTTAGATGGAACGGAAATTGCTGTTAAACAACACAAATGTGCTAGCCTTCAAGGGGAAAAAGAATTTAAGTCAGAGGTCAATCTACTACGCAAAACAAGACACGAGAATGTAGTCATGCTGTTGGGGTCATGCTCTGAGGGAAACAATAGGCTTCTTGTTTATGAATATGCATGCAATGGTTCACTGGATCAACACCTATCTCAACACTCTCGAGCTCCACTTAGATGGGAAGATAGGATTAAAGTAGCTACTGGATCTGCCAAGGGCTTACTATACTTGCATGAGAATAACATCATACATAGAGATATGAGAACAAACAATATCCTCTTAACACATGATCATCAACCACTGCTGGGAGACTTTGGTTTGGCAAGAAGTCAACATCAAGACTCAATCCAGTCAACAGAGGTTGTTGGGACTTTAGGATATTTGGCTCCAGAATATGCAGAATATGGCAAAGTGTCAACTAAGACAGATGTTTATTCTTTTGGGGTAATCCTATTGCAGCTAATAACTGGAATGAAGACCACAGACCAAAGACTTGAAGGCAGAAGTCTTGTGGGATGGGCAAGACCACTATTAAGAGAAAGGAATTATCCAGATCTAATTGACGAAAGGATCATGAATTCTCATGATTACCATCAACTATTTTGGATGGTTCGAATTGCAGAGAAATGTCTAAGCAGGGACCCTCACAAGAGATTAAACATGGGTGAGGTGGTTGATGTTTTAACTCAAATAGCAGAGGGCAAGATATGTGGGAACATAAAGAGAGATTACTTCCCTGTGAGGTCAGATTCATTATACAGCACATCAGATGAAGGTGAAGAAGAATCATCAGAAGATGAAATAATGAATAATGAAGAAGAGAGTTGCAGTACCGATTCCAGTAGCAGCGTGAGCCAGATGGGTTTAGGACTCTCTAACCCTCCATCCCCTCCTCCAATGGAAGAGCATGACCAATTAACTATGGACGCCCCAAGTGCAGAATGA 1830 0.4011 MSLESQRVVVIQDASRDVSTSAIKKVLKQLALKPGDELTILAIFGNKIVKMDSRSFIATDGENLQEELGKIKEEYHNRPQVMKLSEYCQAKNLVFQIEVLAYPSQDVTCNAVNMFRATCLILDRHMNKDKRHCMDNLACGIYRIRNRYSIQMLRKPKLTEKSKSFAERSDHVRNMEVTPGSSEAEFSNKRTRSSSSENLMETGVSILQFESKEKGQTEEPQFEMKEELTEPLCSVCKNERPKPGCMRDFSYSELYTATKGFSQKNFLSEGGFGSVYKGQLDGTEIAVKQHKCASLQGEKEFKSEVNLLRKTRHENVVMLLGSCSEGNNRLLVYEYACNGSLDQHLSQHSRAPLRWEDRIKVATGSAKGLLYLHENNIIHRDMRTNNILLTHDHQPLLGDFGLARSQHQDSIQSTEVVGTLGYLAPEYAEYGKVSTKTDVYSFGVILLQLITGMKTTDQRLEGRSLVGWARPLLRERNYPDLIDERIMNSHDYHQLFWMVRIAEKCLSRDPHKRLNMGEVVDVLTQIAEGKICGNIKRDYFPVRSDSLYSTSDEGEEESSEDEIMNNEEESCSTDSSSSVSQMGLGLSNPPSPPPMEEHDQLTMDAPSAE 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2006g00005 609 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 336 538 - -
Pral2006g00005 609 MobiDBLite consensus disorder prediction 551 568 - -
Pral2006g00005 609 MobiDBLite consensus disorder prediction 180 197 - -
Pral2006g00005 609 SUPERFAMILY Protein kinase-like (PK-like) 246 531 IPR011009 -
Pral2006g00005 609 Gene3D Transferase(Phosphotransferase) domain 1 337 537 - -
Pral2006g00005 609 PANTHER OS01G0253100 PROTEIN 170 527 - -
Pral2006g00005 609 ProSitePatterns Tyrosine protein kinases specific active-site signature. 377 389 IPR008266 GO:0004672|GO:0006468
Pral2006g00005 609 MobiDBLite consensus disorder prediction 569 586 - -
Pral2006g00005 609 MobiDBLite consensus disorder prediction 175 197 - -
Pral2006g00005 609 Gene3D Phosphorylase Kinase; domain 1 234 335 - -
Pral2006g00005 609 Pfam Protein tyrosine and serine/threonine kinase 264 522 IPR001245 GO:0004672|GO:0006468
Pral2006g00005 609 ProSiteProfiles Protein kinase domain profile. 261 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2006g00005 609 MobiDBLite consensus disorder prediction 547 609 - -
Pral2006g00005 609 FunFam Proline-rich receptor-like protein kinase PERK8 223 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2006g00005 Pral-Chr2006 22350 27332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2006g00005 249 537 Trihelix Transcription Factor Family AT5G38560 46.358 7.96e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral2006g00005 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2006g00005 - - pcin:129316641 928.702