Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1g00002 ATGGAGCAGAAACACGTTTTGTTGTCAGCATTGAGCGTAGGGGTTGGTCTTGGAGTAGGGATTGGGTTGAGTTCAGGGCAAGTGGTTCAGAAATGGGTTGGAGGGAATCATGCGCTCTGTGGTGAGCAGATTGAGCAGGAACTTTTAAGGCTGGTGATTGATGGCAAGGAATGCAAGGAAACTTTTGAAGAGTTTCCTTATTACTTAAGTGAAAGAACTTGTGAGTTATTGAGGAGTGCTGCATTCGTTCATTTGAAACAACTTCACTTTTCCAAACACACCCGTAATCTTTCACCGGCAAGTAGGGCAATTCTGCTTTCTGGACCAGCAGAGCTTTACCTGCAAATACTTGCCAAGGCTTTAGCTCATCACTTTGAGTCAAAGTTGCTGCTTCTAGATATTGCTGACTTCTCTTTCAAGATGCAAAGCAAATATGGATGTGCAAGAACAGAATCATCCTCTCAAAGGTCTTTATCTAAGGCGGCTCTCGAGCGAGCGTCCAGTTTTTTGGGTTTCTTTTCAGTTTTCCATTCAACTGGAAAAACTAAAGGCACTTTGCACACACATAGTAATAGTACTGGAAGTTCCAATACATCTTCAAAACTTAGCAGGAATGCCTCTGCTGCATCTGATATGAGTAGCACCGCTTCCCAATGTGGTCCAACAAATTCAGGCACCTTGAAGCACATGAGCAGCTTGTGTTTTGATGAAAAACTCTTCCTTCAGTTGCTCTACAAGGTCTTGGTTTCTGTCTCAGGAAAAAGTCCCATCATTTTATACATTAGGGATGCTGAGAAGATTTTCCTCCAATCAGAACGGCTATGCAATTTGTTTCATAAAATGCTTGAAAAACTTTCAGGGCCAGTGTTGGTACTTGGTTCCCAGATAGTAGATGCTGAGGATGAATTCTCAGAAGTTGATGAAAGGCTTGCAACATTATTTCCTTACAACATTGAGATTAAACCACCCGAAGATGAGATTAGTCTTGGAAACTGGAATGCCCAACTTGAAGAGAACATGAAAATAATTCAGTTTCAAGATAACAAAAAGCACATTGCTGAAGTACTTGCAGCAAATGATATTGAATGTAATGACTTGAATTCAATCTGCCGTGCAGACACAATGGTGCTAAGTAATTATATTGAAGAGATTGTAGTATCTGCTATACGTTATCACTTGATGAATACCAAGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCTGAGAGTCTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAAAAGAACTGCTGAGGATACCCTAAAGCTGGAAGCTAATGGAAACAAGGGCTCAGCTGGCGGAGAGGGGAATGGTGCAAAAAATGAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCGAATTAGACCAGAGGTCATCCCTGCAAATGAGATTGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTGGTCATGCTTCCCCTTCGAAGGCCAGATCTCTTCAAAGGTGGACTTCTTAAGCCTTGCAGAGGCATATTGCTCTTTGGACCTCCAGGTACTGGGAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGTAAGCTTTATCAATGTCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAAAATGTTAGAGCTCTGTTCACATTGGCGGCAAAGGTTGCCCCAACTATTATATTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACAAGAGTTGGAGAACATGAGGCTATGAGGAAGATTAAAAATGAATTCATGACGCACTGGGATGGTCTATTGACAAAACCTGGGGAACAAATTCTAGTCCTTGCTGCAACCAACAGGCCAGTTGACCTTGATGAAGCAATCATACGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCAGCTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGAGCTTGCTGTTATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTTTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCATAAAGCAGGAGAGATTGAAAGACAAGGTAAACAAAAAGGCAGCAGAAAAACAAAACTCAGAGGATGCTTCTGATACTCAGGACGATGGAGAAGAGCAAGTAATTGCCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGCTGAAGGATCAATAATGGCTGAGCTGAAGCAGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGGAAGAAACAGCAACTCACTTACTTCCTATAG 2370 0.4194 MEQKHVLLSALSVGVGLGVGIGLSSGQVVQKWVGGNHALCGEQIEQELLRLVIDGKECKETFEEFPYYLSERTCELLRSAAFVHLKQLHFSKHTRNLSPASRAILLSGPAELYLQILAKALAHHFESKLLLLDIADFSFKMQSKYGCARTESSSQRSLSKAALERASSFLGFFSVFHSTGKTKGTLHTHSNSTGSSNTSSKLSRNASAASDMSSTASQCGPTNSGTLKHMSSLCFDEKLFLQLLYKVLVSVSGKSPIILYIRDAEKIFLQSERLCNLFHKMLEKLSGPVLVLGSQIVDAEDEFSEVDERLATLFPYNIEIKPPEDEISLGNWNAQLEENMKIIQFQDNKKHIAEVLAANDIECNDLNSICRADTMVLSNYIEEIVVSAIRYHLMNTKDPEYRNGKLVISSESLSHGLNLFQEGKRTAEDTLKLEANGNKGSAGGEGNGAKNEEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGVSFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPVDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKTENLDFKELAVMTEGYSGSDLKNFCTTAAYRPVRELIKQERLKDKVNKKAAEKQNSEDASDTQDDGEEQVIALRPLNMEDMRQAKSQVAASFAAEGSIMAELKQWNELYGEGGSRKKQQLTYFL 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1g00002 789 MobiDBLite consensus disorder prediction 184 204 - -
Pral1g00002 789 ProSitePatterns AAA-protein family signature. 619 638 IPR003960 GO:0005524|GO:0016887
Pral1g00002 789 Coils Coil 704 724 - -
Pral1g00002 789 MobiDBLite consensus disorder prediction 435 461 - -
Pral1g00002 789 MobiDBLite consensus disorder prediction 709 725 - -
Pral1g00002 789 Gene3D - 475 647 IPR027417 -
Pral1g00002 789 MobiDBLite consensus disorder prediction 709 732 - -
Pral1g00002 789 Pfam AAA+ lid domain 668 707 IPR041569 -
Pral1g00002 789 Gene3D - 648 730 - -
Pral1g00002 789 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 475 650 - -
Pral1g00002 789 SMART AAA_5 512 649 IPR003593 GO:0016887
Pral1g00002 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 475 705 IPR027417 -
Pral1g00002 789 Pfam ATPase family associated with various cellular activities (AAA) 516 646 IPR003959 GO:0005524|GO:0016887
Pral1g00002 789 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1g00002 Pral-Chr1 5823 13793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1g00002 476 707 Calmodulin-binding Proteins AT3G56690 39.407 2.55e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1g00002 - - cave:132185536 1117.45