Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1g00001 ATGGAGCAGAAACACGTTTTGTTGTCAGCATTGAGCGTAGGGGTTGGTCTTGGAGTAGGGATTGGGTTGAGTTCAGGGCAAGTGGTTCAGAAATGGGTTGGAGGGAATCATGCGCTCTGTGGTGAGCAGATTGAGCAGGAACTTTTAAGGCTGGTGATTGATGGCAAGGAATGCAAGGAAACTTTTGAAGAGTTTCCTTATTACTTAAGTGAAAGAACTTGTGAGTTATTGAGGAGTGCTGCATTCGTTCATTTGAAACAACTTCACTTTTCCAAACACACCCGTAATCTTTCACCGGCAAGTAGGGCAATTCTGCTTTCTGGACCAGCAGAGCTTTACCTGCAAATACTTGCCAAGGCTTTAGCTCATCACTTTGAGTCAAAGTTGCTGCTTCTAGATATTGCTGACTTCTCTTTCAAGATGCAAAGCAAATATGGATGTGCAAGAACAGAATCATCCTCTCAAAGGTCTTTATCTAAGGCGGCTCTCGAGCGAGCGTCCAGTTTTTTGGGTTTCTTTTCAGTTTTCCATTCAACTGGAAAAACTAAAGGCACTTTGCACACACATAGTAATAGTACTGGAAGTTCCAATACATCTTCAAAACTTAGCAGGAATGCCTCTGCTGCATCTGATATGAGTAGCACCGCTTCCCAATGTGGTCCAACAAATTCAGGCACCTTGAAGCACATGAGCAGCTTGTGTTTTGATGAAAAACTCTTCCTTCAGTTGCTCTACAAGGTCTTGGTTTCTGTCTCAGGAAAAAGTCCCATCATTTTATACATTAGGGATGCTGAGAAGATTTTCCTCCAATCAGAACGGCTATGCAATTTGTTTCATAAAATGCTTGAAAAACTTTCAGGGCCAGTGTTGGTACTTGGTTCCCAGATAGTAGATGCTGAGGATGAATTCTCAGAAGTTGATGAAAGGCTTGCAACATTATTTCCTTACAACATTGAGATTAAACCACCCGAAGATGAGATTAGTCTTGGAAACTGGAATGCCCAACTTGAAGAGAACATGAAAATAATTCAGTTTCAAGATAACAAAAAGCACATTGCTGAAGTACTTGCAGCAAATGATATTGAATGTAATGACTTGAATTCAATCTGCCGTGCAGACACAATGGTGCTAAGTAATTATATTGAAGAGATTGTAGTATCTGCTATACGTTATCACTTGATGAATACCAAGGATCCAGAATACCGAAATGGGAAGCTAGTAATATCATCTGAGAGTCTGTCCCATGGTTTGAATCTATTTCAAGAAGGCAAAAGAACTGCTGAGGATACCCTAAAGCTGGAAGCTAATGGAAACAAGGAAGTTCCTCCTGACAATGAGTTTGAGAAGCGAATTAGACCAGAGGTCATCCCTGCAAATGAGATTGGAGTTACATTTGCAGATATTGGTGCATTAGATGAAATTAAAGAGTCACTCCAAGAGCTGGTCATGCTTCCCCTTCGAAGGCCAGATCTCTTCAAAGGTGGACTTCTTAAGCCTTGCAGAGGCATATTGCTCTTTGGACCTCCAGGTACTGGGAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGTAAGCTTTATCAATGTCTCAATGTCTACCATCACTTCAAAATGGTTTGGAGAAGATGAGAAAAATGTTAGAGCTCTGTTCACATTGGCGGCAAAGGTTGCCCCAACTATTATATTTGTTGATGAGGTTGATAGCATGCTTGGGCAGCGAACAAGAGTTGGAGAACATGAGGCTATGAGGAAGATTAAAAATGAATTCATGACGCACTGGGATGGTCTATTGACAAAACCTGGGGAACAAATTCTAGTCCTTGCTGCAACCAACAGGCCAGTTGACCTTGATGAAGCAATCATACGACGGTTTGAGCGAAGAATCATGGTTGGCCTTCCATCAGCTGAGAACAGGGAAATGATCTTGAAGACTCTACTAGCTAAGGAAAAGACTGAAAATTTAGACTTCAAAGAGCTTGCTGTTATGACAGAAGGATACAGTGGAAGTGATCTTAAGAATTTTTGCACAACTGCTGCTTATCGACCTGTTAGGGAGCTCATAAAGCAGGAGAGATTGAAAGACAAGGTAAACAAAAAGGCAGCAGAAAAACAAAACTCAGAGGATGCTTCTGATACTCAGGACGATGGAGAAGAGCAAGTAATTGCCTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCTAAGAGTCAGGTTGCTGCAAGTTTTGCTGCTGAAGGATCAATAATGGCTGAGCTGAAGCAGTGGAATGAGCTATATGGAGAAGGAGGTTCAAGGAAGAAACAGCAACTCACTTACTTCCTATAG 2331 0.417 MEQKHVLLSALSVGVGLGVGIGLSSGQVVQKWVGGNHALCGEQIEQELLRLVIDGKECKETFEEFPYYLSERTCELLRSAAFVHLKQLHFSKHTRNLSPASRAILLSGPAELYLQILAKALAHHFESKLLLLDIADFSFKMQSKYGCARTESSSQRSLSKAALERASSFLGFFSVFHSTGKTKGTLHTHSNSTGSSNTSSKLSRNASAASDMSSTASQCGPTNSGTLKHMSSLCFDEKLFLQLLYKVLVSVSGKSPIILYIRDAEKIFLQSERLCNLFHKMLEKLSGPVLVLGSQIVDAEDEFSEVDERLATLFPYNIEIKPPEDEISLGNWNAQLEENMKIIQFQDNKKHIAEVLAANDIECNDLNSICRADTMVLSNYIEEIVVSAIRYHLMNTKDPEYRNGKLVISSESLSHGLNLFQEGKRTAEDTLKLEANGNKEVPPDNEFEKRIRPEVIPANEIGVTFADIGALDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGVSFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPVDLDEAIIRRFERRIMVGLPSAENREMILKTLLAKEKTENLDFKELAVMTEGYSGSDLKNFCTTAAYRPVRELIKQERLKDKVNKKAAEKQNSEDASDTQDDGEEQVIALRPLNMEDMRQAKSQVAASFAAEGSIMAELKQWNELYGEGGSRKKQQLTYFL 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1g00001 776 MobiDBLite consensus disorder prediction 184 204 - -
Pral1g00001 776 Pfam AAA+ lid domain 655 694 IPR041569 -
Pral1g00001 776 Gene3D - 462 634 IPR027417 -
Pral1g00001 776 MobiDBLite consensus disorder prediction 696 719 - -
Pral1g00001 776 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 462 637 - -
Pral1g00001 776 ProSitePatterns AAA-protein family signature. 606 625 IPR003960 GO:0005524|GO:0016887
Pral1g00001 776 Gene3D - 635 717 - -
Pral1g00001 776 Pfam ATPase family associated with various cellular activities (AAA) 503 633 IPR003959 GO:0005524|GO:0016887
Pral1g00001 776 SMART AAA_5 499 636 IPR003593 GO:0016887
Pral1g00001 776 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 775 - -
Pral1g00001 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 462 692 IPR027417 -
Pral1g00001 776 Coils Coil 691 711 - -
Pral1g00001 776 MobiDBLite consensus disorder prediction 696 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1g00001 Pral-Chr1 5823 13793 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1g00001 463 694 Calmodulin-binding Proteins AT3G56690 39.407 2.14e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1g00001 - - pcin:129318041 1124.77