Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1998g00004 GATTCGACAAAAGTTACTGCTGATTACAGTTCAAGCATCCAGTTACGTGGCTCTGGAGCAAAAATAAAGAGGTCAATAGTAAAGAAGCCTGGGTCATATTGGAATCAGATCAGACCAATGCATTGTGTCAAGGAAGGACATTCATCATTGAATCCTCACTCCTATCCAGTGGATTCCTCATTATTATTCTCAAATATCTACAGTGACGCAGAATCCTCTGAGAAGGCAAAAGAAGCAACCGAAATAGGTTTAACCAATTCACACCCCATTCAATCAGTGTTTCTGGGTTCTGACCGTAGGTACAATAGATACTGGCTTTTCTTAGGGCCTTGCAACGTGGGTGACCCTGGCCATAGGAGAGTTTACTTTGAATCTTCTGAAGATGGTCACTGGGAAGTGATTGATGATGAAGAGGCTTTATGTGCCCTGTTGTCAGTTTTGGATGATAGAGGTAAACGGGAGGCACTTCTTGTTGAATCTTGGGAAGAAGCTGAAAGACCCTCTTGCAGGGCTATGTCCAGGATGATGGTCAACCACACTGGAATGTGCCATACGTCAAATTCTGATCAATCTGATCTTGATAGGATCACAGAAGACAGTTACTCTCCGATATCTGATGTAGATAACGTGAGCCTGATTGAGACGGCCAGTGACTCTCTACCTTCAGCCGGGGCTGTGGTGATAGAAGGTGGGAAGAAGGGAGTAGAACAAATGCAAAAGTGGATCCGTCTTCAAGCATATGATTCATGGATTTGGAATTCCTTTTATTTAAATCTCAATGTTGTGAAATATGGTAGAAGGTCTTATATTGATTCTCTGGCCAGATGTGAGAGTTGTCATGATCTGTTCTGGAGGGATGAGAGACACTGTAAAATTTGCCATTTGACATTTGAGCTTGATTTTGATCTTGAAGAAAGATATGCAATCCACACAGCCACATGCAGGGAGAAAGGCAGTAATGCTTTTCCAAATCACAAAATCTTATCATCGAAGATCCAATCACTGAAGGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGTAGATGCGCTGGTGGGTGCTTGGAGGAAGTCTGCTCATAAGCTATGGGTCAGGCGACTCAGACGCACTTCAACTTTAACTGAGCTATTTCAGGTTGTTGCTGATTTTGTTGGTGCTATCAATGAGGAGTGGTTGTTTCAATGCAGTTTTCCTGATGGTCTGGTTGATAAAATAATTGCTTCTTTTGCACTTATGCCCCATACTTCATCAGCTCTTGCTTTATGGTTAGTGAAGTTGGATGCAATAATTGCTCCCTACCTGGACAAAGTCCAGCCTCTGAAGAAGCAGGACATTACTAAGAGAAAAATCTCTGGTGGTGTTTGA 1365 0.4249 DSTKVTADYSSSIQLRGSGAKIKRSIVKKPGSYWNQIRPMHCVKEGHSSLNPHSYPVDSSLLFSNIYSDAESSEKAKEATEIGLTNSHPIQSVFLGSDRRYNRYWLFLGPCNVGDPGHRRVYFESSEDGHWEVIDDEEALCALLSVLDDRGKREALLVESWEEAERPSCRAMSRMMVNHTGMCHTSNSDQSDLDRITEDSYSPISDVDNVSLIETASDSLPSAGAVVIEGGKKGVEQMQKWIRLQAYDSWIWNSFYLNLNVVKYGRRSYIDSLARCESCHDLFWRDERHCKICHLTFELDFDLEERYAIHTATCREKEXSNAFPNHKILSSKIQSLKAAIYAIESVMPVDALVGAWRKSAHKLWVRRLRRTSTLTELFQVVADFVGAINEEWLFQCSFPDGLVDKIIASFALMPHTSSALALWLVKLDAIIAPYLDKVQPLKKQDITKRKISGGV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1998g00004 455 PANTHER HOMEOBOX PROTEIN SIX 8 434 - -
Pral1998g00004 455 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 91 161 IPR028941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1998g00004 Pral-Chr1998 21863 25296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1998g00004 91 445 Homeobox Transcription Factor Family AT5G44180 25.401 1.09e-21 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1998g00004 - - lja:Lj4g3v3015070.1 668.307