Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1995g00008 ATGAAGAAGACGTACGTGGAGTGTGATGAGAACCAACAGTTTTTATCTATCATAGATAATGGAATTGTAAGGATTAAAAAGTTCCCGCCCGGGTATGGATTTTTCCCCACAGAAGAAGAACTCATTGTGAAGTATCTGATGAAGAAGGTCAAGAATGAACCACTGCCACCAAATCTGATCATACCAGAGGTTGATATATATCAATACGATCCTGCAATTCTATGTGAAAACTACAAAGGCATGGATGAGAAAGCATGGTATTTCTTCTCACCAAGAGAAAGAAAATACCTGACTTGGTCAAGGGCAAAGAGATCCACAAATGAGGGCTATTGGAAAAATTATGGCGTTAGTAACAAGTCAATCTATTCAAAGAAGAGAATTGTGGGAAAATGGAGGATCTTAACATATTTCCAAGGAAAGAGTCCCACTGGAACAAAGACGACCTGGAACATGAAAGAATATTCACTTGTTGACTTGCCTCATCAAAGAACGATCAGTAACACTAATATGAAGTTACGTGACTTTGTCTTGTGCAAGATTTACAAGAGAGTTCCTCATCGTCGTCATGTTCTGAAGAACCAGAATGAAGAAATAAAAATAACATACGATGAAAAGCTTCTTATGCATCAAGAAGAACTTTATCAGGATTATTATAATAATAACCATTTGGTTTCTGCATTAATGCCTACGCCTCAAGATCATGATGATGATGATGACTATTTTTCTTTTCTGGATGGCTATCCTTTAGAGGTTTTGCAAGAAATGGCTAGCGAACTGGAGGACTTGGAGGTTCTTCGTGGAAGACCTATTTTGCTCTCTGAACTTCGTCTTGGTCCATGTGATGGTACCCTATTTGTGAAGGTGGACCGCATAATCACAAGGACCTATGTTAAATTCACACAGAGAAGGAGGAGGCCTATCATTGAAGCAGTTTCTATCGACCTTATACTATTTGACTATTAG 963 0.3842 MKKTYVECDENQQFLSIIDNGIVRIKKFPPGYGFFPTEEELIVKYLMKKVKNEPLPPNLIIPEVDIYQYDPAILCENYKGMDEKAWYFFSPRERKYLTWSRAKRSTNEGYWKNYGVSNKSIYSKKRIVGKWRILTYFQGKSPTGTKTTWNMKEYSLVDLPHQRTISNTNMKLRDFVLCKIYKRVPHRRHVLKNQNEEIKITYDEKLLMHQEELYQDYYNNNHLVSALMPTPQDHDDDDDYFSFLDGYPLEVLQEMASELEDLEVLRGRPILLSELRLGPCDGTLFVKVDRIITRTYVKFTQRRRRPIIEAVSIDLILFDY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1995g00008 320 SUPERFAMILY NAC domain 25 182 IPR036093 GO:0003677|GO:0006355
Pral1995g00008 320 PANTHER NAC TRANSCRIPTION FACTOR 56 28 204 - -
Pral1995g00008 320 ProSiteProfiles NAC domain profile. 28 183 IPR003441 GO:0003677|GO:0006355
Pral1995g00008 320 Pfam No apical meristem (NAM) protein 29 156 IPR003441 GO:0003677|GO:0006355
Pral1995g00008 320 Gene3D NAC domain 37 186 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1995g00008 Pral-Chr1995 158094 162825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1995g00008 28 183 NAC Transcription Factor Family AT1G69490 46.795 8.24e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1995g00008 NAM 1.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1995g00008 - - pcin:129302745 186.422