Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1993g00002 ATGATTAAAACAAAGTGCTTTTTTAAGAGTGACATTGTCAGCTCTTCTGCCATATCTGAGTATGACTGGGCAGCCGAGGGGGATCTGTTCAAGGCTCCTGAACCTATTATTGAAGAACCAGTCATGGACCTGGATCCTGTGGCAGCAGCCATCTCAATGATATCCTGCGGGGAAGATGTTGTTTCCTCACAGGGATTAGAATCCACCGACATAGATGCTCTTCAAAGCGAGCAACTTCTAAGTGAGGTATTCTATGAGTGCAAAAAGGATCTTTTGGAGAAGACTGCAATAGAGTCATCACTATGTGAGATTCTGGATATCAAGTTTCCTGTTCTCAATACAGATGAAAATAAAATTCAAGTAAACAGACAAATTCATGACGTGCCATTACCAAAAAGTGTCAGTTTGGGATGTTTGAGCTCAATGGACTGGATGCAAGGAGCTATGATCAAGCCTGCTTTTCTTGAATTCCCAGGAATAGATTTCAGTGAGGTTTATGGAATGCGGAGGGCATTTAGCGAGGGGGATATTAAGGCTCTGGGTAATGGCAATGGTAATGTGAACCTCATCCAATCTCCTCTTGAGAGGCCCCTTGTTATGAGCAACTGCACGAGTGAGGAACGCAGGGAAAAGCTCTCCAGATACAGGAACAAGAGGACAAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGCCGGAAGGCTTTGGCTGATAGTCAGCCCAGAATCCGAGGAAGATTTGCAAAAACTGAGGAACCTGAGGTCAAGAGGCAATAA 777 0.4389 MIKTKCFFKSDIVSSSAISEYDWAAEGDLFKAPEPIIEEPVMDLDPVAAAISMISCGEDVVSSQGLESTDIDALQSEQLLSEVFYECKKDLLEKTAIESSLCEILDIKFPVLNTDENKIQVNRQIHDVPLPKSVSLGCLSSMDWMQGAMIKPAFLEFPGIDFSEVYGMRRAFSEGDIKALGNGNGNVNLIQSPLERPLVMSNCTSEERREKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEPEVKRQ 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1993g00002 258 ProSiteProfiles CCT domain profile. 208 250 IPR010402 GO:0005515
Pral1993g00002 258 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 126 250 IPR045281 GO:0009909
Pral1993g00002 258 Pfam CCT motif 208 250 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1993g00002 Pral-Chr1993 2546 7083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1993g00002 181 254 C2C2-CO-like Transcription Factor Family AT5G57660 43.210 6.77e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1993g00002 CCT 5.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1993g00002 - - qsa:O6P43_015011 370.933