Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1993g00001 ATGTATGCAGAGACGGGCCTCCTGTTCCCGTATTTCCAGAATTTCTCCCAAGAACTTCAACAACTTGAGGAGTACTGCAAAATCCACAAGTCCAATGCTTCTGTGAGTGACATTGTCAGCTCTTCTGCCATATCTGAGTATGACTGGGCAGCCGAGGGGGATCTGTTCAAGGCTCCTGAACCTATTATTGAAGAACCAGTCATGGACCTGGATCCTGTGGCAGCAGCCATCTCAATGATATCCTGCGGGGAAGATGTTGTTTCCTCACAGGGATTAGAATCCACCGACATAGATGCTCTTCAAAGCGAGCAACTTCTAAGTGAGGTATTCTATGAGTGCAAAAAGGATCTTTTGGAGAAGACTGCAATAGAGTCATCACTATGTGAGATTCTGGATATCAAGTTTCCTGTTCTCAATACAGATGAAAATAAAATTCAAGTAAACAGACAAATTCATGACGTGCCATTACCAAAAAGTGTCAGTTTGGGATGTTTGAGCTCAATGGACTGGATGCAAGGAGCTATGATCAAGCCTGCTTTTCTTGAATTCCCAGGAATAGATTTCAGTGAGGTTTATGGAATGCGGAGGGCATTTAGCGAGGGGGATATTAAGGCTCTGGGTAATGGCAATGGTAATGTGAACCTCATCCAATCTCCTCTTGAGAGGCCCCTTGTTATGAGCAACTGCACGAGTGAGGAACGCAGGGAAAAGCTCTCCAGATACAGGAACAAGAGGACAAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGCCGGAAGGCTTTGGCTGATAGTCAGCCCAGAATCCGAGGAAGATTTGCAAAAACTGAGGAACCTGAGGTCAAGAGGCAATAA 855 0.448 MYAETGLLFPYFQNFSQELQQLEEYCKIHKSNASVSDIVSSSAISEYDWAAEGDLFKAPEPIIEEPVMDLDPVAAAISMISCGEDVVSSQGLESTDIDALQSEQLLSEVFYECKKDLLEKTAIESSLCEILDIKFPVLNTDENKIQVNRQIHDVPLPKSVSLGCLSSMDWMQGAMIKPAFLEFPGIDFSEVYGMRRAFSEGDIKALGNGNGNVNLIQSPLERPLVMSNCTSEERREKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFAKTEEPEVKRQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1993g00001 284 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 150 276 IPR045281 GO:0009909
Pral1993g00001 284 ProSiteProfiles CCT domain profile. 234 276 IPR010402 GO:0005515
Pral1993g00001 284 Pfam CCT motif 234 276 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1993g00001 Pral-Chr1993 2546 7428 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1993g00001 207 280 C2C2-CO-like Transcription Factor Family AT5G57660 43.210 7.73e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1993g00001 CCT 5.9e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1993g00001 - - qsa:O6P43_015011 427.172