Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1991g00061 ATGGAGGATCACCATCGTCCGCATCAACATCCGCAGCAACATCTTGAGTATGGTACTATGGGGGATCTCCGGCACCTTATGAATGCACCGAGGTCGCTCTCGGCGGACCTCTTCCCGGCTCACCCGAATTTGACGCCCACCCACCACTACGACGCCTTGTCTTTTGGTCGTCATCAACTGATGGCTGATATAATGCCTCGCGGCCTTCACGATTCTTCTGCTCTTAATACTAGCATTTCCGTGGCCACTCCCGCTGCCGCCGCCAGTACTCCCACGTTCAGTGCCTTTGAGGCAGACACTTCTGGGGGTTTCCCCGGAGACGCCTCCACCGCACGATGGCCCAGACAGGAAACTCTAACACTTCTTGAGATCAGATCTCGTCTTGACTCTAAGTTCAGACACGCCAATCAGAAGGGCCCCTTATGGGATGAACTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTCGAAAACTTGTATAAATATTACAAGAAAACAAAGGAAGGCAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTTCGCCAACTTGAAGCCTTATATGGAGAAAGCAACAACCCAACCTCAGTCCAAGAAACCAATTTGGGTGGCAACAGTCTTCACTTTCACACCCCCTCCCAAACAAACCAAGACATTTTTAATAGGCACTGTGATAGCGTGAGCCTCACTAATAACTCCACTGAGGTGGACACATCATCATCGGATGAAAATGATTCAATGGAGAAGAGGAGAAAGAGAAGAGGAAGAAGCTGGAAAGTAAAGATAAAAGAGCTGATCGATTCGGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAAGACACTGGAGGAGAAGGAAAAGGAGAGGGCACTGAGAGAGGAAGAATGGAGTAGACAAGAGGCAGCCAGGTTAGATAATGAGCATAAGTTTTGGGCTAAAGAGAGGGCATGGATTGAAGCCAGAGATGCAGCTTTAATGGACGCATTGCAAAAATTAACAGGAAGAGAAATAAGGGCTGGTGATCCAACTACTGCTGATATTCAAAATTACAGCGAAAACCAGAATGAAGATGGAAGTGAAATACTACATAGCACTGACAGAGTTGGTGAAAGTTGGACAGAATCTGAGATCACTACTCTCTTTCAGGTGAGAGCTGAGGTGGAATCCAGGTTTGGGCAAAGTGGGTGTCCGGAGGAGGTTCTGTGGGAGGAAGTTGCCAACAAAATGACTTGTTTTGGCTACCATAAAGCTGCTTCCGTGTGCAAAGACAAGTGGGAAAGTATCAGAAGCTATTACAAGAAGCGCAAGCAAAATTCTGCTAGTTTTTACTTGGAAACCAATAATCAGTCACCCCTATATAATCAAGCAAGTGTTTATTGTGATGTCAACCAACAGCGGCAGATTGGTTCTTCACCTTCAAATTCTAACGTTGGCAATGCTGCTAGGGCTGATAGTTGTTTTCCCTTGTTTATGTGTGAAGGAGAAAATATGTGGGAAAATTTCGGCTTAAAGTTCAACAAAGGAAACCAAAACCCGTGA 1590 0.4579 MEDHHRPHQHPQQHLEYGTMGDLRHLMNAPRSLSADLFPAHPNLTPTHHYDALSFGRHQLMADIMPRGLHDSSALNTSISVATPAAAASTPTFSAFEADTSGGFPGDASTARWPRQETLTLLEIRSRLDSKFRHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGESNNPTSVQETNLGGNSLHFHTPSQTNQDIFNRHCDSVSLTNNSTEVDTSSSDENDSMEKRRKRRGRSWKVKIKELIDSEMKKVMEKQEAWLERLMKTLEEKEKERALREEEWSRQEAARLDNEHKFWAKERAWIEARDAALMDALQKLTGREIRAGDPTTADIQNYSENQNEDGSEILHSTDRVGESWTESEITTLFQVRAEVESRFGQSGCPEEVLWEEVANKMTCFGYHKAASVCKDKWESIRSYYKKRKQNSASFYLETNNQSPLYNQASVYCDVNQQRQIGSSPSNSNVGNAARADSCFPLFMCEGENMWENFGLKFNKGNQNP 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1991g00061 529 MobiDBLite consensus disorder prediction 241 264 - -
Pral1991g00061 529 SMART sant 109 172 IPR001005 -
Pral1991g00061 529 SMART sant 385 448 IPR001005 -
Pral1991g00061 529 Pfam Myb/SANT-like DNA-binding domain 388 456 IPR044822 -
Pral1991g00061 529 Pfam Myb/SANT-like DNA-binding domain 112 198 IPR044822 -
Pral1991g00061 529 PANTHER FI21293P1 87 491 - -
Pral1991g00061 529 CDD GT1 389 453 - -
Pral1991g00061 529 FunFam Trihelix transcription factor GT-2 389 451 - -
Pral1991g00061 529 ProSiteProfiles Myb-like domain profile. 105 170 IPR001005 -
Pral1991g00061 529 Coils Coil 282 312 - -
Pral1991g00061 529 CDD GT1 112 177 - -
Pral1991g00061 529 FunFam trihelix transcription factor PTL-like 113 175 - -
Pral1991g00061 529 Gene3D - 113 175 - -
Pral1991g00061 529 Gene3D - 389 451 - -
Pral1991g00061 529 ProSiteProfiles Myb-like domain profile. 381 446 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1991g00061 Pral-Chr1991 393003 395540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1991g00061 13 524 Trihelix Transcription Factor Family AT5G03680 43.529 9.33e-135 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral1991g00061 Myb_DNA-bind_4 3.8e-14 CL0123