Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1991g00057 ATGGAAGAAAAAGATGCCCATGTTTTTGGGTCACCGGGGAACTCAGACTCCGGGCAGCATGTGCAACCCGTCGGAGTCTCCGTGCCTCAGGTAACGAACATGACGGGGAATATGAACTTGCAGAACAGTGGAGGCGCAGCACCAATGACATCGCCTGCAAGTACCGGAGGAGGAGGGCAAGGGAGTTTGGATTTGTTCGGGAAAAAGAAGAGAGGGAGGCCGAGAAAATATGATTCAGATGGGAAGCCGAGGGTGACGACGTCGTACCCGGGTGCAGCATCAAAACAAGGCTTTTCTTTTTCCCCAACCTCACCTTCTGAGTTCTCCACCAAAAGGGGGCGAGGCAGACCACCTGGCTCTGGCAACTGGCAGCTCCTCGCATCTTTAGGTGAGTTGTTTGCAAACACAGCAGGTGGGGATTTCACACCTCATGTAGTCACTGTTCATTCTGGAGAGGATGTCGCTGGAAAAATCGTGTCATTTGCTCAGAAAGGTACAAGAGGAGTTTGCGTTCTTTCTGCCAATGGAGCTATATCTAATGTCACTCTACGGCAGCCTGGTTCTTCTGGTGGCTTATTAACATACGAGGGTCGGTTCGAGATTTTGTCCTTGTCCGGGTCATTCACAATGTCTGATAATGGCGGCATGAGAAGTCGAACTGGTGGGTTGAGTGTCTCACTGGCCGGCCCTGATGGTCGTGTCATAGGCGGTGGCGTTGCTGGTCTCCTAACTGCTGCTAGTCCAATCCAAATTGTGATGGGAAGCTTCATGCCGTATGGTCACAAGGCACAGAAAAGAAAGCAACATCGTGAGAACACTGCGGCATCTCCAGTTTCTGGTGCGGATGCTGTGATGGCGGCAAGGCCTATCTCACAGGCAAATCCTGATGCTGCTGAAAACTGTTTCACTCCCATGGCCCAGCAGCAGCTTCCAGAGCAAAGCCACAGAGAATCAGACAACATTACAAGCAGCGATAAGCAGAGTTTAGATGCCACACCCATTGCTTCTGATTGGAATGGATTTGAAGAGTTGTCAGATCAGGGCCCAACCCCAGACATCAATATATCTCTGCCTGGGGAATAG 1083 0.5115 MEEKDAHVFGSPGNSDSGQHVQPVGVSVPQVTNMTGNMNLQNSGGAAPMTSPASTGGGGQGSLDLFGKKKRGRPRKYDSDGKPRVTTSYPGAASKQGFSFSPTSPSEFSTKRGRGRPPGSGNWQLLASLGELFANTAGGDFTPHVVTVHSGEDVAGKIVSFAQKGTRGVCVLSANGAISNVTLRQPGSSGGLLTYEGRFEILSLSGSFTMSDNGGMRSRTGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVMGSFMPYGHKAQKRKQHRENTAASPVSGADAVMAARPISQANPDAAENCFTPMAQQQLPEQSHRESDNITSSDKQSLDATPIASDWNGFEELSDQGPTPDINISLPGE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1991g00057 360 ProSiteProfiles PPC domain profile profile. 138 281 IPR005175 -
Pral1991g00057 360 MobiDBLite consensus disorder prediction 89 110 - -
Pral1991g00057 360 Gene3D - 143 275 - -
Pral1991g00057 360 MobiDBLite consensus disorder prediction 66 82 - -
Pral1991g00057 360 SMART AT_hook_2 111 123 IPR017956 GO:0003677
Pral1991g00057 360 SMART AT_hook_2 68 80 IPR017956 GO:0003677
Pral1991g00057 360 CDD DUF296 142 256 IPR005175 -
Pral1991g00057 360 MobiDBLite consensus disorder prediction 309 360 - -
Pral1991g00057 360 MobiDBLite consensus disorder prediction 1 122 - -
Pral1991g00057 360 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Pral1991g00057 360 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 42 317 IPR039605 GO:0003680
Pral1991g00057 360 MobiDBLite consensus disorder prediction 12 58 - -
Pral1991g00057 360 Pfam AT hook motif 111 120 IPR017956 GO:0003677
Pral1991g00057 360 Pfam AT hook motif 68 79 IPR017956 GO:0003677
Pral1991g00057 360 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1991g00057 Pral-Chr1991 365978 369205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1991g00057 68 281 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.712 7.92e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1991g00057 - - qsa:O6P43_009509 445.662