Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1991g00053 ATGAACAAGGCTTTTCCTCTAAACTTTGCATTGGCCTTGGCCCTGGCCTTACTTTGTTGTGTCACACAATCTCTGGGCTCAACCCAAAACGACACTCACGCTCTCACTCAATTCCGCCTCCAAGCTGATTCTCATGGCTATCTTCTCGTCAACTGGACCGGCGCCGACGCCTGCGCTGCTTTTTGGCGCGGCGTTCAGTGCTCCCCTAATGGCCAAGTCGTTGGCATCTCGCTCCCTTCTCTTAGTCTCCGAGGACCGGTCGATGCTCTGTCTTCGTTAAGCTACTTGCGCCTCCTTGACCTCCATGATAATCGCTTAAACGGCAGCGTTGCGCCTCTCTCTAACTGTACCAGTCTTGAACTTCTTTATCTCTCCGGGAATGACTTCTCCGGCGAGATACCGCCGCAGATAGCTTCGCTCACGCGTCTGCTCAGGCTTGACGTCTCTGACAACAACATCCGAGGTCCTATCCCTAAGGAACTGTCCAAATTGACAGCGCTTCTCACGCTTAGGCTACAAAACAATGAGCTTTCGGGACATATCCCTGATCTTTCTGTTTCCCTGCTCAAACTCAAGGAGCTCAACATGACCAACAACGAATTCTATGGAAGCTTACCGGATGGCATGTTGAAGAAATTCAGTGACGTAAGTTTCTCTGGGAATAAAGGTTTATGTGGATCAAGCCCATTGCCGATTTGTTCCGCCGCAGCAGACAATTTTCCTTCTTCTTCAGCATCGGCTCCAACAGCTCCTTCTAAGCCAACCTCGATGCCCCAAACAAGCGCAACTCCTCCTCCAAAACGCCAACCTCGAAAGGGATTAAGCACCGGAGTTATTGTAGCCATTGTGGTGGCGAACTGTGTGGCATTGCTGGTAGTGACTTCTTTCATCGTTGCTCATTGCTGCGCCAGAAGACGAACCTCCGATTCTATGTTGGGCAGTGAGATTGGCAAGAGGAAAAGCGGGAGTAGCTATGGAAGTGAAAAAAAGGTGTACGCCAGTGGGTGTGTAGACAGCGACGGAACCACCGGAACCGACCGGAGCAGGCTTGTATTTTTTGATAGAAGAAGTCAATTCGAGCTGGAAGATTTGTTGCGAGCATCGGCGGAGATGCTGGGAAAGGGGAGCTTGGGAACAGTGTACAAGGCAGTGCTCGATGATGGATGTACCGTAGCGGTTAAGAGACTCAAAGACGCAAACCCATGTGCGAGGAAGGAGTTCGAGCAGTACATGGATGTGATTGGAAAGCTCAAGCACCCCAATGTTGTGAGGCTCAGAGCTTATTACTATGCACGAGAAGAAAAGCTCCTCGTTTATGATTATCTCCCCAACGGAAGCTTGCATTATCTTCTTCACGGGAACCGTGGCCCAGGAAGAATCCCACTGGATTGGACTACAAGAATAAGCTTGGTTTTGGGGGCAGCCAGAGGACTTGCTCGGATTCACGCTGAATATAGTGCAGCAAAAATACCCCACGGCAACATCAAATCTTCCAATGTTGTCCTCGACAAGAATGGCGTTGCTTGCATCTCTGACTTCGGCTTGTCTCTGCTATTAAACCCTGTTCATGCAATTGCAAGATTGGGCGGATACAGAGCTCCCGAACAAGAAGAGAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTCGGTGTCTTGCTGTTGGAAGTTCTCACAGGTAAAACCCCATCCCAGGAGCCTTCACCGACACGTCCTAGGTTGGTTGAAGAGGAACAAACCGTGGATCTCCCCAAATGGGTGCGATCTGTAGTGAAGGAAGAATGGACAGCGGAAGTGTTTGATCAAGAACTGTTGAGGTACAAGAACATAGAGGAAGAGCTGGTGTCCATGTTGCATGTGGGGTTGTCGTGTGTGATGGCAGAACCAGAGAAGAGGCCAATCATGGCGGAAGTTGTTAAGATGATTGAAGAGATCAGGGTGGAGCAATCTCCTCTGGGCGAAGACTATGATGAGTCTCGCAATTCGCTTTCACCTTCCCTTCCCACCACTGAAGATGGACTAGCTTAA 2031 0.5007 MNKAFPLNFALALALALLCCVTQSLGSTQNDTHALTQFRLQADSHGYLLVNWTGADACAAFWRGVQCSPNGQVVGISLPSLSLRGPVDALSSLSYLRLLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGEIPPQIASLTRLLRLDVSDNNIRGPIPKELSKLTALLTLRLQNNELSGHIPDLSVSLLKLKELNMTNNEFYGSLPDGMLKKFSDVSFSGNKGLCGSSPLPICSAAADNFPSSSASAPTAPSKPTSMPQTSATPPPKRQPRKGLSTGVIVAIVVANCVALLVVTSFIVAHCCARRRTSDSMLGSEIGKRKSGSSYGSEKKVYASGCVDSDGTTGTDRSRLVFFDRRSQFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLKDANPCARKEFEQYMDVIGKLKHPNVVRLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEESKKLSQQADVYSFGVLLLEVLTGKTPSQEPSPTRPRLVEEEQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVMAEPEKRPIMAEVVKMIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1991g00053 676 ProSiteProfiles Protein kinase domain profile. 366 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00053 676 MobiDBLite consensus disorder prediction 243 272 - -
Pral1991g00053 676 Gene3D Phosphorylase Kinase; domain 1 339 441 - -
Pral1991g00053 676 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 648 IPR046959 -
Pral1991g00053 676 FunFam pollen receptor-like kinase 1 337 441 - -
Pral1991g00053 676 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Pral1991g00053 676 Gene3D Ribonuclease Inhibitor 138 236 IPR032675 -
Pral1991g00053 676 MobiDBLite consensus disorder prediction 243 257 - -
Pral1991g00053 676 MobiDBLite consensus disorder prediction 651 676 - -
Pral1991g00053 676 Gene3D Transferase(Phosphotransferase) domain 1 442 664 - -
Pral1991g00053 676 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 442 655 - -
Pral1991g00053 676 Gene3D Ribonuclease Inhibitor 30 137 IPR032675 -
Pral1991g00053 676 SUPERFAMILY Protein kinase-like (PK-like) 370 644 IPR011009 -
Pral1991g00053 676 Pfam Protein kinase domain 370 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00053 676 FunFam Nuclear pore complex protein NUP107 28 183 - -
Pral1991g00053 676 CDD STKc_IRAK 372 646 - -
Pral1991g00053 676 SUPERFAMILY L domain-like 30 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1991g00053 Pral-Chr1991 333284 336077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1991g00053 24 672 Receptor kinase-like Gene Family AT2G36570 67.121 0.0 883
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral1991g00053 Pkinase 5.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1991g00053 - - qsa:O6P43_009504 1036.56