Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1991g00049 | ATGGAATGGAATGGAAGCATGAGACCCTTTGTTCCTCGAGCTGAGTCTTCCTTAAGTTTCCTCTACAACTATAACTGCAGCCCATATCCAGGAATGGAAGTGAAACATGCAGCGGCGGCACCAGGGTTGGTTCCGGATATGGAGAAAATAAAATACGGGAACCAGATGGAGAAGAAGAAGCGACTGACGAGCGAGCAGCTTGAGTCGCTGGAGAGGAGCTTCCAGGAAGAGATAAAGTTGGACCCCGATAGGAAGATGAAACTCTCAAGGGAGCTAGGACTGCAACCTCGCCAAATTGCTGTATGGTTCCAAAATAGGCGTGCTAGGTGGAAGGCTAAGCAGCTGGAGAACTTGTATGATGCTCTCAAACAAGAATATGATGCTATCTCTGAGGAAAAACAGAGGCTTCAAGAAGAGGTTGTGAAGTTGAAGGCAATACTAAGAGAGCAAGCTTCAAAGACACAAGTCTCTGCAGGTTATACAGAAGTTTCTGGGGAAGAAACAGTGGAAAGCACGTCAGAGGCAGCACTGCGCGGCTCTAACAAGCAGCCACGGGGAACGACGTCGAGCCATCACCCGCAGAATATTGCAGAAGCCAATTGTTCTTTCGCTGTAGAGGATTATAGCACTGTTTCACTGCCCTACTGGCCCGCTCTTGTGCCTTATTATCCTTAA | 675 | 0.4815 | MEWNGSMRPFVPRAESSLSFLYNYNCSPYPGMEVKHAAAAPGLVPDMEKIKYGNQMEKKKRLTSEQLESLERSFQEEIKLDPDRKMKLSRELGLQPRQIAVWFQNRRARWKAKQLENLYDALKQEYDAISEEKQRLQEEVVKLKAILREQASKTQVSAGYTEVSGEETVESTSEAALRGSNKQPRGTTSSHHPQNIAEANCSFAVEDYSTVSLPYWPALVPYYP | 224 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1991g00049 | 224 | PRINTS | Lambda-repressor HTH signature | 84 | 93 | IPR000047 | GO:0003677 | |
Pral1991g00049 | 224 | PRINTS | Lambda-repressor HTH signature | 93 | 109 | IPR000047 | GO:0003677 | |
Pral1991g00049 | 224 | MobiDBLite | consensus disorder prediction | 158 | 194 | - | - | |
Pral1991g00049 | 224 | Pfam | Homeobox associated leucine zipper | 113 | 147 | IPR003106 | GO:0006355|GO:0043565 | |
Pral1991g00049 | 224 | Coils | Coil | 53 | 73 | - | - | |
Pral1991g00049 | 224 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 52 | 192 | IPR045224 | GO:0003700 | |
Pral1991g00049 | 224 | SMART | HOX_1 | 56 | 117 | IPR001356 | GO:0003677 | |
Pral1991g00049 | 224 | ProSiteProfiles | 'Homeobox' domain profile. | 53 | 113 | IPR001356 | GO:0003677 | |
Pral1991g00049 | 224 | Coils | Coil | 105 | 153 | - | - | |
Pral1991g00049 | 224 | CDD | homeodomain | 58 | 114 | IPR001356 | GO:0003677 | |
Pral1991g00049 | 224 | SUPERFAMILY | Homeodomain-like | 46 | 115 | IPR009057 | - | |
Pral1991g00049 | 224 | FunFam | Putative homeobox-leucine zipper protein ATHB-51 | 55 | 118 | - | - | |
Pral1991g00049 | 224 | ProSitePatterns | 'Homeobox' domain signature. | 88 | 111 | IPR017970 | GO:0000981|GO:0006355 | |
Pral1991g00049 | 224 | Pfam | Homeodomain | 58 | 111 | IPR001356 | GO:0003677 | |
Pral1991g00049 | 224 | Gene3D | - | 56 | 117 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1991g00049 | Pral-Chr1991 | 308566 | 309871 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1991g00049 | 16 | 143 | Homeobox Transcription Factor Family | AT5G03790 | 62.319 | 6.80e-49 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Pral1991g00049 | Homeodomain | 3.2e-17 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1991g00049 | - | - | gmx:100778007 | 285.804 |