Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1991g00047 ATGGGAGACAATCACGAAGAGGATCGGACTGAGAGCAGCGATTTCACTTCAGAGGATGAAGGCACCGAGGACTATCGACGGGGAGGCTACCACGCTGTGCGAGTCGGCGATGCCTTCAAGAATGGTCGCTATGTTGTTCAGAGCAAGCTCGGTTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATCCAACTTTCTAGATACGTGGCTCTTAAAGTTCAAAAGAGCGCTCAGCATTACACAGAGGCAGCCATGGATGAGATAACCATTTTACAACAGATTGCAGATGGAGACCCAGAAGATAAAAAGTGTGTGGTAAAGCTTTTGGATCATTTCAAGCATTCAGGTCCCAATGGACAGCATGTTTGTATGGTATTTGAATACCTTGGAGATAATCTTTTAACGCTTATCAAGTATGCTGATTACCGAGGATTGCCAATCAACATGGTTAAAGAGATATGCTTTCACATTTTGGTTGGATTGGATTACTTACATAAGCAGCTTTCTATAATACATACTGACTTGAAGCCTGAGAACATCCTCCTATTATCAATGATAGATCCATCCAAGGATCCTAGAAAGTCTCTCTCTCCTTTAATTCTACCCAATGCTAAAGATAAAACGGCACTTGTATCGGGAATTGGGAAAGAAGTGAAAACATCAAATGGGGAATTAATGCGGAATCATAAGAAAAGGATTAAAAGGAAAGCTAAGCAGGCAGCTCAAGGATGTGTAGAGAAGGAAGCTTCCGAGGTAGTTGAGGGGGATCCTGAAACATCTGGTGCTGCAGAATCATCTGTGAATGCAATAGTAAATGCAGTTTCTGGAGGAGAACAAGTTTCTAGTTCTGCAGGTACCAATAGGTTATCAGATGAGGATGGGACAAGGGTCGACTGGTCAAAAAACCAGGGTAACAAAAGAGGAACCCGGTCATTGAGGCAGAAGTTGCTAAAGTCAGTTGACCTCAAGTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACGTATAAACAGTTTACAAATGATATTCAGACAAGACAATATCGGTGTCCAGAAGTGATCCTTGGATCAAAATATTCTACATCAGCAGATCTTTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCTACTGGTGACGTGCTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGATGAGGATCACTTGGCACTAATGATGGAACTTCTGGGCATGATGCCACGTAAGATTGCACTGGGGGGCCGTTATTCCCGTGATTTTTTCAATAGATATGGTGATCTGAGGCACATCCGTCGTCTGCGTTTTTGGCCCCTGAACAAAGTTCTCGTGGAGAAATATGATTTCAATGAGCGAGATGCCAATGAAATGGCCGACTTTTTGGTTCCTATTCTCGACTTTGTTCCCGAGAAACGACCAACAGCCGGTCAGTGCCTTCTGCATCCGTGGATCAATGCTGGTCCCCGCCTTTTGGAGCCATCTGCGCCATCTTCTAACCACAATTCAGCTGCAGATGGTGCTGTTTCTGACCAAAAGAAAAAGGATAAGGACGATAGAGAGGCCATGGAGGCAGGGATGGGGAATATTGCCATCAATTCAGATTCTAAGCCACACACTGATTCATCAGCGAATGCCTTTCAAACCAGTCAGAAGTAG 1659 0.4436 MGDNHEEDRTESSDFTSEDEGTEDYRRGGYHAVRVGDAFKNGRYVVQSKLGWGHFSTVWLAWDIQLSRYVALKVQKSAQHYTEAAMDEITILQQIADGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYADYRGLPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSLSPLILPNAKDKTALVSGIGKEVKTSNGELMRNHKKRIKRKAKQAAQGCVEKEASEVVEGDPETSGAAESSVNAIVNAVSGGEQVSSSAGTNRLSDEDGTRVDWSKNQGNKRGTRSLRQKLLKSVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYDFNERDANEMADFLVPILDFVPEKRPTAGQCLLHPWINAGPRLLEPSAPSSNHNSAADGAVSDQKKKDKDDREAMEAGMGNIAINSDSKPHTDSSANAFQTSQK 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1991g00047 552 MobiDBLite consensus disorder prediction 508 524 - -
Pral1991g00047 552 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Pral1991g00047 552 MobiDBLite consensus disorder prediction 278 311 - -
Pral1991g00047 552 CDD STKc_SRPK 33 485 - -
Pral1991g00047 552 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00047 552 MobiDBLite consensus disorder prediction 533 552 - -
Pral1991g00047 552 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 514 - -
Pral1991g00047 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pral1991g00047 552 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00047 552 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00047 552 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00047 552 FunFam CMGC/SRPK protein kinase 30 129 - -
Pral1991g00047 552 Gene3D Transferase(Phosphotransferase) domain 1 127 486 - -
Pral1991g00047 552 MobiDBLite consensus disorder prediction 1 27 - -
Pral1991g00047 552 SUPERFAMILY Protein kinase-like (PK-like) 40 497 IPR011009 -
Pral1991g00047 552 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Pral1991g00047 552 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Pral1991g00047 552 MobiDBLite consensus disorder prediction 493 507 - -
Pral1991g00047 552 MobiDBLite consensus disorder prediction 492 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1991g00047 Pral-Chr1991 301213 304725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1991g00047 10 537 EF-hand Containing Proteins AT5G22840 68.173 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pral1991g00047 Pkinase 1.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1991g00047 K08832 - qsa:O6P43_005863 919.072