Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1991g00040 ATGATCGCTAAACCAAACATAAGTTCACGCTTCCAATTTAGCTATGTCCTCCTCCTTTTATCTTTCCTGAGTCATCATTGTACTTCTCAAAAGACTTGCCCAAACTGTGGTTCCTTACAAATTCCATATCCTTTAAGCACTGACCCTAGCTGTGGTGATCCATCCTATAGCCTTCACTGTGATCCCAAATCTAAAAAACTCTACTTTAACACCCTCAATGGAAGTTCCTATTCCGTTCTCAGAATTATGTCTTCGATCCAACGCTTGGTGGTGCAGCCATCACCTTGGCTTTCTAGTTCATGTGTTACCCAAGATATGCCTGTAAGTGGTGGCTTCTCGTTAAACGAGTCACTTCCTTTCAAAATAACTTCATCCAACACAGTCTTCCTCTTTAACTGCTCACCTCGCCTGTTGGTTTCTCCTCTCAATTGCACTTCTTCTAGTCTCTGTCACCGTTACTTGGAGAGCTCAGGACATGTTGACAGCAAAAGAGCTCTTCAGTGTGCCAGTGGTGTTGGCCCTTGTTGCACCTTTGTTCCAGGTGGGATGCCTTCAGCATACAAGATACGCCTTCACAGCTCTGGCTGTAAAGCGTTCAGAAGCATCCTTCATTTAGATGCAGAGAAACCTGCTTACCAGTGGGAGGAAGGTCTTGAAATTCAATGGGCTTCTCCTCCTGAACCTCTCTGCAGGGCGCAGCAAGATTGCTCTGGAGCTTCTATCTGTTCCCCACCTGAAAAAAATGGTGTCTTTCGCTGTCTTTGCAAGGTAGAATACCATTGGGACCCTATGGCTGCAACTTGCTTGAAGAACAAGAAAAAACCTAAATCACGGGTCAGCTTAACAGTCTCGACTGTGGTTGTAACTTTTTTTTGTCTAGCCACAGTTGTGGCCATCATCTTAAGGAGGTCCTGGAAGCTCTCTTACCGGTCAAAGCACGCAAAGACAATAGAAGATGTGATAAAGTCAAATTCTGGAGAGACACCTGCTAGGATGTTTAAACTGAAGGAGGTGATAAAAATAACAAATGGATTTTCTAAAGACAGAATTTTGGGGAATGGTGGGTTTGGGGAAGTCTACAGAGGTGAACTTCAAGATGGGACAGTCGTGGCTGTGAAGAAAGCTAGATTGGGCAACCTCAAAAGCATCCAACAGATACTAAACGAGGTTGCAATTCTATCTCAAGTCAATCACAAGAACCTAGTCAGGCTCCTAGGTTGCTGTGTAGAATCTGAGCAACCTCTGATGATCTATGAGTACATCTCAAACGGGACCCTCCACGACCATCTTCATGGTAGGTATTCTAACTTCCTAGACTGGAAAACGAGGCTGAAGGTTGCTTTTCAAACTGCTGAATCATTGGCGTATCTTCATTCTGCTGCACATACTCCCATTTACCATAGAGATGTGAAGTCCACAAACATACTGCTAGATGATGAATTTAACGCTAAAGTTGCAGATTTTGGGCTCTCCAGATTGGCTAACCCAGGACTTAGTCATGTGTCAACCTGTGCTCAGGGAACATTGGGCTATTTGGATCCTGAGTATTACCGCAACTACCAGTTAACTGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTGGAGCTTTTAACTTCCCAGAAGGCCATAGATTTCTCAAGAGAGCAAGATGATGTAAACCTAGCAATTTTTGTTAGTCAACGTGCCAGCAACGGGTCAATCATGGAACTGGTAGATCAGAGGCTCCTAGTGTCTAAGGAAGCGTCTGACGATAAAGTGAAAACAAGCGTACAACTTTTCTCAGAGCTAGCACTCAGCTGCCTGAGAGAAAAGAAAAGCGAAAGGCCAAGTATGAAGGACATTGTTCAACACCTTCAGAGCATCATTAAAATTATAGATCAAGTGAGGAATAGTGATCAGGTATCTGTTTAA 1917 0.4361 MIAKPNISSRFQFSYVLLLLSFLSHHCTSQKTCPNCGSLQIPYPLSTDPSCGDPSYSLHCDPKSKKLYFNTLNGSSYSVLRIMSSIQRLVVQPSPWLSSSCVTQDMPVSGGFSLNESLPFKITSSNTVFLFNCSPRLLVSPLNCTSSSLCHRYLESSGHVDSKRALQCASGVGPCCTFVPGGMPSAYKIRLHSSGCKAFRSILHLDAEKPAYQWEEGLEIQWASPPEPLCRAQQDCSGASICSPPEKNGVFRCLCKVEYHWDPMAATCLKNKKKPKSRVSLTVSTVVVTFFCLATVVAIILRRSWKLSYRSKHAKTIEDVIKSNSGETPARMFKLKEVIKITNGFSKDRILGNGGFGEVYRGELQDGTVVAVKKARLGNLKSIQQILNEVAILSQVNHKNLVRLLGCCVESEQPLMIYEYISNGTLHDHLHGRYSNFLDWKTRLKVAFQTAESLAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVADFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSREQDDVNLAIFVSQRASNGSIMELVDQRLLVSKEASDDKVKTSVQLFSELALSCLREKKSERPSMKDIVQHLQSIIKIIDQVRNSDQVSV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1991g00040 638 ProSitePatterns Protein kinases ATP-binding region signature. 351 374 IPR017441 GO:0005524
Pral1991g00040 638 Pfam Wall-associated receptor kinase galacturonan-binding 33 90 IPR025287 GO:0030247
Pral1991g00040 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pral1991g00040 638 Gene3D Transferase(Phosphotransferase) domain 1 421 636 - -
Pral1991g00040 638 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 319 420 - -
Pral1991g00040 638 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 624 IPR044652 GO:0004672
Pral1991g00040 638 FunFam Wall-associated receptor kinase-like 20 421 633 - -
Pral1991g00040 638 CDD STKc_IRAK 351 623 - -
Pral1991g00040 638 ProSiteProfiles Protein kinase domain profile. 345 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00040 638 SMART serkin_6 345 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00040 638 Pfam Protein kinase domain 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1991g00040 638 Gene3D Phosphorylase Kinase; domain 1 306 420 - -
Pral1991g00040 638 SUPERFAMILY Protein kinase-like (PK-like) 322 621 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1991g00040 Pral-Chr1991 265267 267869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1991g00040 33 629 Receptor kinase-like Gene Family AT5G02070 47.680 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral1991g00040 Pkinase 6.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1991g00040 - - gmx:100804678 948.732