Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1991g00023 ATGAGATTTAACAAGATCCTCTTCTGGCTACTTTGCCTTTTCACCTTTTCCCTTTCCATCATAATTGTCTGTCATTACACGCCATCTTCCCTCACCGCCATCTCTTCCATTGCTCCTCAGAGTAATTTCAAGCAACATGTGATCTTAAGTAGGATTATAAAGCTGAGTGGCGCTGAAGACTTTGTGTCTCTAATAAGAAGACTTGCGAGGAGGCTTCCCTACCGAGTGAAGCACAAGGAGAAATGTGACAAGGGCATCTGGGATTCTGATCTTGTTGTGGACTATAATGTGAGTCTTGTTTTAACCGTTAGCTTGAAAGGTTGTGGAAATTTTAGCAGCATACAAAAAGCTGTAAATGCTGTTCCTGAAGCGAAGCCTGATAGAACTCTCATCATCGTTGATTCTGGCATATACAGAGAGAAGGTAACGGTGGAGGCAAGCAAAACAAATTTGATATTGCAAGGTAAAGGATATCTGAACACAATCATAGCATGGAATGATACCGCCAATTCCACAGGAGGGACCTTTAATAGTTACACAGTTGGAGTCTTTGCTTCTAAGTTTCTTGCTTACAACATTAGTTTTAAAAATACGGCTCCAGCACCATCACCAGGTATGACAGGAGCACAAGCAGTAGCGCTAAGGGTGAGTGGCGACGAAGCAGCATTCTACGAATGTGGAATGTATGGTGCTCAGGACACCCTCAATGATGATACTGGAAGACATTACTTCAAAGAATGTTTCATCCAAGGATCCATTGATTTCATATTTGGGAATGCTAGATCTCTTTATGAGGATTGTACCCTAAACTGTATATCAACAGACGAAGGGGCTATGATTACCGGGTCCATCACAGCTCAAGCAAGACAATCAGAGAATGAAGAAACTGGGTTTTCATTTGTGAATTGTAAGATTGATGGCAGAGGAAAAGTATGGCTTGGAAGAGCATGGGGAGCTTATGCCACCGTAGTCTTCTCAACAACATATATGTCTGATGTTGTAGCTCCTGAAGGATGGAATGATTGGTCTAATTCTACGAGAGACATGACTGTCTTTTTTGGGGAATATCGCTGTCTTGGTGGTGGAGCCAACTACTCGTCTAGAGTCTCATATGCAAAGCAACTTAAAGACCATGAAGCAGCCCGTTTCATGAATGTTTCTTATATTGATGGAAATGATTGGCTCCTCAATCATCCAAAATAG 1203 0.419 MRFNKILFWLLCLFTFSLSIIIVCHYTPSSLTAISSIAPQSNFKQHVILSRIIKLSGAEDFVSLIRRLARRLPYRVKHKEKCDKGIWDSDLVVDYNVSLVLTVSLKGCGNFSSIQKAVNAVPEAKPDRTLIIVDSGIYREKVTVEASKTNLILQGKGYLNTIIAWNDTANSTGGTFNSYTVGVFASKFLAYNISFKNTAPAPSPGMTGAQAVALRVSGDEAAFYECGMYGAQDTLNDDTGRHYFKECFIQGSIDFIFGNARSLYEDCTLNCISTDEGAMITGSITAQARQSENEETGFSFVNCKIDGRGKVWLGRAWGAYATVVFSTTYMSDVVAPEGWNDWSNSTRDMTVFFGEYRCLGGGANYSSRVSYAKQLKDHEAARFMNVSYIDGNDWLLNHPK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1991g00023 400 FunFam Pectinesterase 95 400 - -
Pral1991g00023 400 Gene3D - 95 399 IPR012334 -
Pral1991g00023 400 Pfam Pectinesterase 102 392 IPR000070 GO:0030599|GO:0042545
Pral1991g00023 400 ProSitePatterns Pectinesterase signature 2. 249 258 IPR033131 -
Pral1991g00023 400 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 93 395 - -
Pral1991g00023 400 SUPERFAMILY Pectin lyase-like 98 395 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1991g00023 Pral-Chr1991 168239 170201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1991g00023 93 395 Carbohydrate Esterase AT1G05310 53.420 1.40e-116 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1991g00023 - - gmx:100802034 581.637