Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1990g00006 ATGTGGGTTTACGTCAATTCGATCGCGTTCATTGAAATGGGTGAGGAGGTTAAGGCAATTGTTCCCGAGTCTGTGTTGAAGAAGAGGAAGAGAGAAGAGGAATGGGCATTGGCCAAGGCACAGGAGACCGAAGCTGCAAAAAAGAAGAGAGCTGAGAGCAGAAAGCTGATCTACAACAGAGCTAAGCAGTATGCCAAGGAGTATCAGGAGCAGGAAAAGGAGTTGATTAGATTGAAACGTGAGGCAAAGCTGAAAGGTGGATTTTATGTTGATCCAGAGGCTAAACTCTTGTTTATTGTTCGCATCCGTGGTATTAATGCCATGCACCCAAAGACAAGGAAAATCTTGCAGCTCTTGCGTTTGAGGCAGATATTCAATGGCGTGTTTCTTAAAGTCAACAAGGCTACAATGAATATGCTTCACAGGGTCGAACCTTATGTGACCTATGGGTATCCAAACTTGAAGAGTGTAAGAGAACTCATTTACAAGAGGGGCTATGGTAAGATCAACAAACAGAGAATTGCTTTAACTGACAATTCTATCATTGAGCAGGCACTGGGTAAGTATGGAATCATCTCCACTGAAGATCTTATCCATGAGATCATAACAGTTGGACCCCACTTCAAGGAGGCCAACAACTTCCTTTGGCCCTTTAAACTCAGGGCACCTTTGGGTGGACTAAAGAAGAAAAGAAACCACTATGTTGAAGGTGGTGATGCTGGAAACCGGGAGAATTTCATCAATGAGCTCATTAGGAGAATGAACTAA 768 0.4336 MWVYVNSIAFIEMGEEVKAIVPESVLKKRKREEEWALAKAQETEAAKKKRAESRKLIYNRAKQYAKEYQEQEKELIRLKREAKLKGGFYVDPEAKLLFIVRIRGINAMHPKTRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKINKQRIALTDNSIIEQALGKYGIISTEDLIHEIITVGPHFKEANNFLWPFKLRAPLGGLKKKRNHYVEGGDAGNRENFINELIRRMN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1990g00006 255 FunFam 60S ribosomal protein L7 201 255 - -
Pral1990g00006 255 SUPERFAMILY Ribosomal protein L30p/L7e 96 255 IPR036919 -
Pral1990g00006 255 PANTHER 60S RIBOSOMAL PROTEIN L7 19 255 IPR039699 -
Pral1990g00006 255 ProSitePatterns Ribosomal protein L30 signature. 115 147 IPR018038 -
Pral1990g00006 255 Gene3D - 197 255 IPR036919 -
Pral1990g00006 255 Gene3D - 96 196 IPR036919 -
Pral1990g00006 255 Pfam Ribosomal L30 N-terminal domain 21 92 IPR012988 -
Pral1990g00006 255 Pfam Ribosomal protein L30p/L7e 97 147 IPR016082 -
Pral1990g00006 255 NCBIfam 60S ribosomal protein uL30 22 255 IPR005998 GO:0000463|GO:0003735|GO:0022625
Pral1990g00006 255 Coils Coil 54 85 - -
Pral1990g00006 255 CDD Ribosomal_L7_archeal_euk 96 255 IPR035808 -
Pral1990g00006 255 FunFam 60S ribosomal protein L7 96 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1990g00006 Pral-Chr1990 34104 36173 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1990g00006 16 255 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 85.417 3.55e-155 429