Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1989g00001 ATGACAGAGATCATTGTTTCCATTGCTGCTAAAGTCTCAGAACATCTGGTGAATTTAACCATACGTCAAGGACAGTATTTGTTTCGTGTCAACAAAATCAGGAAGAATCTTGAGACTGAGAAGAAGGCACTGACTTCAACTCATGATCGTGTACAGAAAAGAGCTGAAGAAGCTAATCATAAAGCAGAAAAGGTCAATTATGTAGTTTCAAGTTGGCTGAATGACGTGATGGAACTCATAAAAGAGGTGGAGCAGTTGGAACAAGAAATACCGCTCCACAGCAGCAGTTGTTTGCGAGGGAAGTTTCCTACCAGGAGCAGATACATGCTGTGCAAGAAAATGAAAAAGAAAACAGAGGCTATGATGCAGCTGAACAAAAAATGTCACTTTGAACCATTTTCCTTCCCTGTCCCAATTCCAGATATAGAGCATTTCTCTTCTGGAAACTTTGAGTATTTTAAGTCTACAAGATTGGCTGCTGATCAACTTTTGGAAGCACTAAAAGATGATAGTAGTTATATAATTGGTTTATATGGGATGGGAGGCTCTGGGAAAACAACACTGGTCAAAGAAGTGGGTAAGAAAGCAAAAGAATTAAAGCTATTTGATCATGTTGTATTTACCACTGTGTCCCAGTCTCCAAATGTCATGAAAATTCAAGACGAAATTGCTGACTTGTTGGGCCTGAAATTGGATGAAAAAAGTGAAGCAGGGAAAGCAAGGCGGATATCTGTGAGATTACAAAGTGGCGAACGTATTCTCATAATTTTGGATGATGTCTGGACAAAGCTCAACCTTGAGGATATAGGGATTCCTGTTGATGGAAATCTCAAGGGTTGTAAGGTGCTTCTTACCACTCGTCGTCATGACGTGTGCAGTTTAATGGACTGTCGAAAGAGGATTCCCCTAGATCTCTTATCTGAAGAGGAAGCTTGGAGTTTATTCCGAAAGCATGCAGGCATAGATGCTGTGTTATCTTCCAACTTGCCGAACAATATGCAACTGCAACGGGAGGTTTGTAAGGAATGTAAAGGACTGCCCATTGCAATTGTCACTGTGGGATCCTCCTTAAAAGGAAAATCAAATGGAGTTGATGAGTGGAAGGTAGCATTACAAAGTTTGAGAGATTCAAAACCTGTGGATGTGGATGAAGGCCTTGGGGATGCTTTCAATTGTCTTAAATTAAGTTACGATTACTTGAAAAGAGATGATACCAAGTTGCTTTTCTTGATATGTTCTGTGTTTCCAGAAGATCATGAGATCCCTGTTGACGACTTGGTCAAATATGGAGTGGGACTGGGTATCTGTGGGGGGTCATTTGATTCAGCTAGTACCCGATTGAGAATGTGCATTAATACACTTGTAGATTCTTGTCTGTTGATGCGTTGTGAGATGAGTAAAGTTGACCAGCTCTTTCGCCCTAAAAAGGACCATGTAAAAATGCATGATATGGTTCGTGACGTAGCTTTATGGATAGCATCAAAAGATCGAGCTATTATAGTAAATCCTGCCAGAAATCTGAACACATCAATAGAAAGTGAAGCCACAAAAGATTGTTATGCACTGTCTTCATGGTACAATAATGGAACCGATAAGTTTCTTCATAGATTGGATGCTCCAAAACTTCAGATCCTGCTAATAAATCTTTCTGCTCATACAGTTCCCCTGGGATTGACAGGTTGCTTGGAATTATCTGATGAATCATTTCAAGGTCTGAAAGAACTTAAGGTTCTGGCTTTGATCGATAAAAGTTATTATCGGAAAATGGCTATATCATTCCCCCAATCATTGGAGATGTTGACTAATCTTCAAACTCTGCGCTTAGTAGGGTTGGATTTGGGTGATATCTCTTTTGTGGTGAGCCTAAAAAGACTTAAGATTCTTGACTTGCAAGATAGTAAATTCAATGAACTGCCCAATGGAATCACAATGCTGGACAAGTTGAAGTCGCTGGATTTGTCACAATGCATAATCAAGGAGCCTTGTTTTGAAGTAATAAGAAGATGCTCACAACTAGAAGAGTTATATGCATTCGGCCATGGCGATTGCTCAAGTCCTAGAATTATGGATCACTATCAATGCTTCAGGGATGATGATGATGTTATTTTCCCAAATTTGCAGAGGTACAAATTATATTTAGGGCCGCTTATGAGCTATCCATGTGAACTGCATTCATCAAGCAAGAAAAATCTATATGTGAACGGATTTAATCCCTCAGCTTCAGATGCTTTTGTTAAGTATCTTCTGCAAAGGACATTGGATGTTCGTCTGTATGGCCTTCGTGGAGGATGCAAAAATATCTTTCCAGCTACAGTTCAAGCTGTCGGATGCATGAATGAGATGACTCATCTCCAGCTCATTTTTTGTTCGGAGTTGGAATGCCTAGTAGATTCTACTTCCAATAATGCAGATAAAATCCTGCTAGATGCAGCATTCCCTGAACTGGTTGAGTTATGTCTGGAACGTATGAATAATTTAAAAGAATTGTGGCGTGGTCCATTTGTGCATTGTTTCTTTGAGAAGTTACAAGTCATTAGAATGGTGTCTTGCAACCAGTTGCACAACATCTTTCCTCGGGAATGTAACATGCAGAATCTTAAGAAGCTCTCAATATTCAAATGCCGGACTTTGACATCCATCTTCCTGATGTCGGTTGCAAGGACTCTGGCGAAGCTAGAATGTCTAATTATCAAAGAGTGCTCAGAATTGAGGTATATAATAAATAGTGAAAAAGAAGATGGCACAGATGCGGAGGATGTAACAGTTCATATGCCATATGATTCTCATGAGGTACTCCCTGAACTGAAGGAGCTCATCATCAGTTCCTGTAACAAGTTAGAATTTATACTCCCAAATTCTTGTGTTGAAGGCCTTTTGCAGCTGCGGAAAATACAGGTTTCTCGTGCCCCTAAGATGAAATATATCTTTGGTCCATCCCACAATGAAGATCAATTATCTTATCTGAACAGGACCAAGATGGCGCTTCCTCTCCTAGAAGAAATAGAACTTCAAAGTCTCCCAGATCTTCTTGGGATTTTCGCAGGAAACTATAATTTAAGCTGGGAATGTCTTAAGAAACTAACATGGAGAACTTGTCCCAAATTGAGCACAAATTCATCTCACAACAATTTGAATTTTGCTTTGGAACATCAACAGCTTCCTCCAAATACGGAAACCCACCTTGGCAAGGAATACTTAACCTCAAAATTAGAAAAGTTGTCCTTACTAAATGTACATGATTTGAGGTTCATATGGACAGCTTCCACTTTGTCACAAGCTCTGAGGCTTCAACATCTTCGTTCTTTGACTGTGAGTAGGTGCAGAAAGCTAAAATCTGTCTTTCCTTCAGTTATCCAAAGATGCCTGCCAGAGTTACAGGAACTATACATAGGAAACTGTGAAGAGTTGGAAGAAATTGTTGCAGAGAATGAAAAATATGATAATGTATCCATTTCTCAAGCGTGCTTTCCAAAACTTTCAAGGATTGAAGTGTGGCGATGCAACAAGTTGAAAAGCCTTTTTTCTACTGCCATAGCTAGAAATCTTCCTCAACTAAGCAGTCTAATCATAGTTGATGCTCCTCAGTTAAAGGAGATTTTCAGACATGGTAATGACGCAGATCCTGTGTATGGGGAGCCACTCATCTTGCAAAATTTGAAAGAATTAAGAATCGAGAAATTGAAGAGTCTTGTTAATGTTGGAATCCTTTTACCCACAAAAGAGCTTTGCAAAGTTCGCAGACATGATTGCCCAAATATTGGGAGCAGCATAGTTGATTCTGCTTCTTAA 3789 0.3956 MTEIIVSIAAKVSEHLVNLTIRQGQYLFRVNKIRKNLETEKKALTSTHDRVQKRAEEANHKAEKVNYVVSSWLNDVMELIKEVEQLEQEIPLHSSSCLRGKFPTRSRYMLCKKMKKKTEAMMQLNKKCHFEPFSFPVPIPDIEHFSSGNFEYFKSTRLAADQLLEALKDDSSYIIGLYGMGGSGKTTLVKEVGKKAKELKLFDHVVFTTVSQSPNVMKIQDEIADLLGLKLDEKSEAGKARRISVRLQSGERILIILDDVWTKLNLEDIGIPVDGNLKGCKVLLTTRRHDVCSLMDCRKRIPLDLLSEEEAWSLFRKHAGIDAVLSSNLPNNMQLQREVCKECKGLPIAIVTVGSSLKGKSNGVDEWKVALQSLRDSKPVDVDEGLGDAFNCLKLSYDYLKRDDTKLLFLICSVFPEDHEIPVDDLVKYGVGLGICGGSFDSASTRLRMCINTLVDSCLLMRCEMSKVDQLFRPKKDHVKMHDMVRDVALWIASKDRAIIVNPARNLNTSIESEATKDCYALSSWYNNGTDKFLHRLDAPKLQILLINLSAHTVPLGLTGCLELSDESFQGLKELKVLALIDKSYYRKMAISFPQSLEMLTNLQTLRLVGLDLGDISFVVSLKRLKILDLQDSKFNELPNGITMLDKLKSLDLSQCIIKEPCFEVIRRCSQLEELYAFGHGDCSSPRIMDHYQCFRDDDDVIFPNLQRYKLYLGPLMSYPCELHSSSKKNLYVNGFNPSASDAFVKYLLQRTLDVRLYGLRGGCKNIFPATVQAVGCMNEMTHLQLIFCSELECLVDSTSNNADKILLDAAFPELVELCLERMNNLKELWRGPFVHCFFEKLQVIRMVSCNQLHNIFPRECNMQNLKKLSIFKCRTLTSIFLMSVARTLAKLECLIIKECSELRYIINSEKEDGTDAEDVTVHMPYDSHEVLPELKELIISSCNKLEFILPNSCVEGLLQLRKIQVSRAPKMKYIFGPSHNEDQLSYLNRTKMALPLLEEIELQSLPDLLGIFAGNYNLSWECLKKLTWRTCPKLSTNSSHNNLNFALEHQQLPPNTETHLGKEYLTSKLEKLSLLNVHDLRFIWTASTLSQALRLQHLRSLTVSRCRKLKSVFPSVIQRCLPELQELYIGNCEELEEIVAENEKYDNVSISQACFPKLSRIEVWRCNKLKSLFSTAIARNLPQLSSLIIVDAPQLKEIFRHGNDADPVYGEPLILQNLKELRIEKLKSLVNVGILLPTKELCKVRRHDCPNIGSSIVDSAS 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1989g00001 1262 Coils Coil 69 89 - -
Pral1989g00001 1262 Gene3D Ribonuclease Inhibitor 535 702 IPR032675 -
Pral1989g00001 1262 FunFam Probable disease resistance protein At1g61300 152 300 - -
Pral1989g00001 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 412 IPR027417 -
Pral1989g00001 1262 Gene3D - 150 301 IPR027417 -
Pral1989g00001 1262 SUPERFAMILY L domain-like 480 1036 - -
Pral1989g00001 1262 SUPERFAMILY RNI-like 833 1200 - -
Pral1989g00001 1262 Gene3D - 305 401 IPR042197 -
Pral1989g00001 1262 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1063 1252 - -
Pral1989g00001 1262 FunFam Probable disease resistance protein At1g63360 397 491 - -
Pral1989g00001 1262 Coils Coil 34 61 - -
Pral1989g00001 1262 Pfam NB-ARC domain 161 398 IPR002182 GO:0043531
Pral1989g00001 1262 PRINTS Disease resistance protein signature 174 189 - -
Pral1989g00001 1262 PRINTS Disease resistance protein signature 343 357 - -
Pral1989g00001 1262 PRINTS Disease resistance protein signature 247 261 - -
Pral1989g00001 1262 PRINTS Disease resistance protein signature 620 636 - -
Pral1989g00001 1262 Gene3D Ribonuclease Inhibitor 987 1206 IPR032675 -
Pral1989g00001 1262 Gene3D Ribonuclease Inhibitor 751 986 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1989g00001 Pral-Chr1989 11529 17114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1989g00001 175 496 WRKY Transcription Factor Family AT5G45050 25.228 2.00e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1989g00001 - - pcin:129317221 1226.85