Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00032 ATGGCGGGAGCTTTGGTTGGTGGTGCTTTTCTTTCTGCTTTTCTTCAGGTGGCTTTCGATAGGCTGGCTTCTCGGGATGTTCTGGACTTCTTCAAAAAACCAAAATTGAACCAGACATTGCTCAATAAGTTGAAGATGGTGCTGTTATCCATCGACGCTGTGGTTGACGATGCAGAGCAAAAGCAGATCACCAATCCGAAGGTGGAGGAGTGGATTGATTTGGTCAAAGATGCCGTGTTCGATGCTGAGGATGTCCTGGATGAGATTGATTATGAAATGTGCAAGCGCAAGCTGGAAGCTGAACAAGAGAGTCAAACCAGTGCTATTGGCAAGGTACGAAACTTCTTTAGTACTCCCATTAGTTCATTTGAGAAGGAAATTGAATCCAAGATGAAAAATGTCCTTGAAAATCTAGAATATCTTGCATCTCAAAGGGACATATTAAGATTGAATGAACGTGATAGTCGTGCTGGATTGAGAACTGCTATACCAGATAGATTGCCAACTACATCTTTAGTGGATGAAGCCGGAATATATGGTAGAGATGATGACAAAGAAACCATCATTGAATGGCTTATGTCAGAAAAGTATAACAACCAACTATCTGTGATTTCTATAGTGGGTATGGGTGGTCTGGGTAAAACTACTCTTGCCCAGCTTGTATATAATGACAGAAGGCTGATGGATGGATTCAACCTCAAAGTTTGGGTGTGTGTCTCTGATGAGTTCGATGTGTTGAGGGTAACAAGAACAGTTTATGAGGCAATCACTAGATATAAGTATGATACTAATGATTTAAATATGCTTCAAATTAAATTGAAACAACAACTAACTCAAAAGAGATTTCTCCTTGTTTTAGACGACATGTGGAATGAAAATTATATGCTATGGGAGGCCTTGCAATCACCATTTAATCATGGGGCTTTGGGAAGCAAAATTCTTCTAACCACTCGCAGTGGAAAAGTTGCTTCGACCATGCGTTCTACTAAGATACTTTCATTGAAGCCCTTATCGGAAGGAGATAGTTGGTCATTGTTTAGCAAATATGCCTTCCATGATGGAAATATTCTTTGTTCAAACTCTGACCTTGAAGAAATTGGTGGAAAAATAAGTAAAAAATGCAAAGGACTGCCTTTAGCTTTAAAAGCCATTGGGAGCCTCTTGTACACAGAATCATCTCATGAGAGGTGGAATGGCATTTTGAAAAGTGAGATTTGGGAGGAAAAAAGGATAGCAAGATTCTCCCTGCTTTGA 1254 0.3987 MAGALVGGAFLSAFLQVAFDRLASRDVLDFFKKPKLNQTLLNKLKMVLLSIDAVVDDAEQKQITNPKVEEWIDLVKDAVFDAEDVLDEIDYEMCKRKLEAEQESQTSAIGKVRNFFSTPISSFEKEIESKMKNVLENLEYLASQRDILRLNERDSRAGLRTAIPDRLPTTSLVDEAGIYGRDDDKETIIEWLMSEKYNNQLSVISIVGMGGLGKTTLAQLVYNDRRLMDGFNLKVWVCVSDEFDVLRVTRTVYEAITRYKYDTNDLNMLQIKLKQQLTQKRFLLVLDDMWNENYMLWEALQSPFNHGALGSKILLTTRSGKVASTMRSTKILSLKPLSEGDSWSLFSKYAFHDGNILCSNSDLEEIGGKISKKCKGLPLALKAIGSLLYTESSHERWNGILKSEIWEEKRIARFSLL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00032 417 Gene3D - 31 132 - -
Pral1988g00032 417 PANTHER DISEASE RESISTANCE PROTEIN RP 41 407 IPR044974 GO:0006952
Pral1988g00032 417 PRINTS Disease resistance protein signature 276 290 - -
Pral1988g00032 417 PRINTS Disease resistance protein signature 374 388 - -
Pral1988g00032 417 PRINTS Disease resistance protein signature 203 218 - -
Pral1988g00032 417 Pfam NB-ARC domain 182 402 IPR002182 GO:0043531
Pral1988g00032 417 Pfam Rx N-terminal domain 10 103 IPR041118 -
Pral1988g00032 417 Gene3D - 336 414 IPR042197 -
Pral1988g00032 417 Gene3D - 161 332 IPR027417 -
Pral1988g00032 417 FunFam Probable disease resistance protein At1g61300 166 330 - -
Pral1988g00032 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 407 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00032 Pral-Chr1988 261932 263185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00032 173 385 WRKY Transcription Factor Family AT5G45050 26.484 2.01e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00032 - - pcin:129316670 580.482