Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1988g00031 ATGGGTGGTTTGGGTAAAACTACTCTTGCCCAGCTTGTTTATAATGATGGTAGGGTGATGGATGGTTTCAACCTCAAAGTATGGGTGTGTGTCTCATATGAGTTTGATGTGTTGAGGGTAACAAGAACAATTTATGAGGCAATCACCGGATCTAAGGATGATACCAATGATTTAAATATGCTTCAAATTAAATTAAAACAACAACTAACTCAAAAGAGATTTCTCCTTGTTTTAGATGACGTATGGAATGAAAATTATATGTTGTGGGAAGCCTTGCAATCACCATTTAATCATGGGTCTCTAGGAAGCAAAATTCTTCTAACCACTCGCAGCAGAAAAGTTGCTTCAACCATGCGTTCTACTAAAATACTTCCATTGAAGCCCTTATCAGAAGGAGACAGTTGGTCATTATTCAGCAAATATGCATTCCATGATGGAAATGTTCTTTGTGCAAACCCTGACCTTGAAGAAATTGGTAGAAAAATCAGTGAAAAATGCAAAGGGTTGCCTTTAGCTCTGAAAGCCATTGGGAGTCTCTTATACACAGAATTATCTCATGAGCAATGGAATGGCATTTTGAATAGTGTGATATGGGAGGAAAAAAGTGATAGCACAATTCTCCCTGCTTTGAGATTGAGTTATTGCTACCTCCCCTCTCATCTTAAAAGATGCTTTGCTTATTGTTCAATATTTCCTAAAGATTATGACTTTGATAAGGAGCATTTAATTCAATTGTGGATGGCTGAAAATTTTCTTACATGTTCTCATCAAAGCAAAGATGCGAGAGAAGTAGCAGAACAATTTTTTCATGACCTATTGTTGAGGTCACTTTTTCAGCGTTCAATAGTGGATGAAACACGTTTTGTCATGCATGACCTTATTAATGATATGGCAAAAGTTGAATATGGAAAGTTTTGCCATAGGTTGGAGGTAGATGGTGTAAATAATTTGACAAAAATGACCCGCCATGTTTCATTTTTGAGAAATAATGTTGATCCATCCAAACGATTTGAGGTTATATACCTAGCTGATAAATTGCGCACATTCTTGCCTTTATCTATACAAGGTTGTAGTAGCACAAGCTATGCTTCTAACTCTAATCTTCACCTTATATCTCATAGGATTATTCATGATTTGTCATCCAAGTTTACTTGCATGCGAGTTTTATCTTTGTCAGATCACTTCATCATGCATTTGCCTGAGTCAGTGGGAAATCTCAAACATCTACGTTATCTGGACTTATCAGGAACTAAAATAAGGAAATTGCCTGATTCAATATGTCAACTTCATCATTTGCAAACACTAAAGCTGTGGCGTTGTCGTCGTTTGGAAATGTTGCCAATGGATCTCCATAAACTTTTGAATCTCCGTCACCTTGATTTTCGCGAAACTCAAGTAAGAGAGATGCCAAAGCAATTGGACAAATTGAAAAATCTTCAACTGCTATCATCATTTATTATGGACAAATTTGGAGAGACCAACATTAAACATTTAGGAGGACTTAATCTTCATGGATCAATTTCCATCTCGGAATTGCAGAATATATTCTCTCCTTCAACAGCTCATGCAGTCAATTTAAGAAGCAAGATAAACCTGAAGGAGTTGACATTAGAATGGTGCAAAGACAAAGAAAAATCACTACATGACAAGGATGTGCTAGAGAACTTTCAACCCCATAAAAATTTAAAAAAGCTATCAATTGGGAACTATGGTGGTATCGAGTTTCCTAATTGGCTTGCTGATCATTCGTTGTCTAATTTACTGTTCCTAGAACTAAGGCATTGCAAATACTGTAGATCCTTGCCATCAATTGGCCTCTTTCCATCTCTCAAGTCATTGTCAATTATAGGGTTTCATAGCATAGTAGCTATTGGTCCAGAATTTTGTGGAAATAGCTCTAATGCTTCATCCCTAGAAATCCTGAGGTTTGGAGATATGAAGGCCTGGGAAGAATGGAAATGTGAAATTTTGTCTCTTACATTCCCTCATCTTCAGGAGTTGAGTATAAAAAACTGTCCCAAATTGAAAGGGCAACTTCCTCAACAACTTCCTTCTCTAACGATGCTAGTAATTTACAATTGTGAGAAGCTTTTATCTTCAATTCCATGGGCTCCATCTCTTGATAAATTGGTCCTAAGAGATTGCGGAAATGAGCAGTTGGAATATCTTCCATCAACTCTAAAAGTCCTTGACATTTCTGGATGCTTTGGAAACTTATTAGCAGTTGACAAAATTAAGAATATCATTTCTAATTGTAGCCTTGAAGAGTTGAAGTTTTCTGACTGCCCCCACCTAGAATTCCCATTATACTATTGTCATAACTTCATTCTTGAAATGGAGATAAGAGGAAGCTGTGACTCTCTTAAGTCTTTTCCACTAGACTTATTCCCGAAGCTTCAATCATTGAAGTTGGTTGACTGTAATAATCTTGAAATGATATCTATTTCAGAAGGGTATCATTTTTCTCTTACAAGCTTGTACATACGAAAGTGTCCTAGATTTGTATATTTTCCTGAAGGAGGGTTTTTGGCTCCCAATCTAGAATTTTGTTGCATTGAAGAATTGGAGAATTTGAAATCGCTCCCTGAGAAGATGCACATTCTCTTTCCCTCCCTCGCATGTCTTTTAATAAAATGCTGCCCACAAGTGGAATCATTTCCAGAGGGAGGTTTCCCATCAAATCTCATATATCTTGAGGTCTTGGGGTGCCCAAAACTCATAGCCTCTCGTATGGGATGGCATCTAAGTAGCTCTACTTCGCTAGAATACTTTGGGGTTGGAGATGCAGATGATGAGTCCCTTCCTGATATTGGACTACTTCCACGTACTCTAACTTGCCTTGTTTTCCATAGCTGCCCAAATCTTAGATCGTTGCAACACAAAGGTCTTTGCCACTTATCCTCTTTGGAAATCTTGGGATTTTGTGGCTGTCCTCAACTCCAATACTTTCCAAAGGAGGGCTTGCCTAGTTCCCTTTGTCAACTACAGATTGTGGGCTGTCCCTTGCTAAAAAAGCAGATCCAAAAGCGTAAAGGAAAATTTTGGGCAAAGATTTCTCACATCCCTTTTGTTAGCATTGAAGAGGATGTAATCGAATCTTTAAGTGAGCTTCTCTCTCGTGAAGGCATCAGCTTTCGTTCTATCCCTTCACTCATTAGAACATTGTCTGAAAGTGAGCATTTGATGATTGTATCGACCGCCAATTGTACGAGCTTCACAAAGAGCTTCTTGTGGGAAAGGAGAAGTATTTTTAAGGCCCAGAAGAGCATAAACATGAAGCAAGGAGTAATCCTTCAAATATTAAAGGTGCCCTTCAAAGCAAAAGCTCTTGATATTGAGCAGATTGTTAATGATGGCAATTCTGCATGTGATGATGCGGAAGTGGATTTCTTTATCGAAATCTACGCTAATGTAGAGGAACATGAAGCAAAACCAATAGCAATAGGTCTTGGACATGAAATCAGAAAAGTAGAATCCTCTGAAGAGCTTCAAGATCAATAA 3501 0.3787 MGGLGKTTLAQLVYNDGRVMDGFNLKVWVCVSYEFDVLRVTRTIYEAITGSKDDTNDLNMLQIKLKQQLTQKRFLLVLDDVWNENYMLWEALQSPFNHGSLGSKILLTTRSRKVASTMRSTKILPLKPLSEGDSWSLFSKYAFHDGNVLCANPDLEEIGRKISEKCKGLPLALKAIGSLLYTELSHEQWNGILNSVIWEEKSDSTILPALRLSYCYLPSHLKRCFAYCSIFPKDYDFDKEHLIQLWMAENFLTCSHQSKDAREVAEQFFHDLLLRSLFQRSIVDETRFVMHDLINDMAKVEYGKFCHRLEVDGVNNLTKMTRHVSFLRNNVDPSKRFEVIYLADKLRTFLPLSIQGCSSTSYASNSNLHLISHRIIHDLSSKFTCMRVLSLSDHFIMHLPESVGNLKHLRYLDLSGTKIRKLPDSICQLHHLQTLKLWRCRRLEMLPMDLHKLLNLRHLDFRETQVREMPKQLDKLKNLQLLSSFIMDKFGETNIKHLGGLNLHGSISISELQNIFSPSTAHAVNLRSKINLKELTLEWCKDKEKSLHDKDVLENFQPHKNLKKLSIGNYGGIEFPNWLADHSLSNLLFLELRHCKYCRSLPSIGLFPSLKSLSIIGFHSIVAIGPEFCGNSSNASSLEILRFGDMKAWEEWKCEILSLTFPHLQELSIKNCPKLKGQLPQQLPSLTMLVIYNCEKLLSSIPWAPSLDKLVLRDCGNEQLEYLPSTLKVLDISGCFGNLLAVDKIKNIISNCSLEELKFSDCPHLEFPLYYCHNFILEMEIRGSCDSLKSFPLDLFPKLQSLKLVDCNNLEMISISEGYHFSLTSLYIRKCPRFVYFPEGGFLAPNLEFCCIEELENLKSLPEKMHILFPSLACLLIKCCPQVESFPEGGFPSNLIYLEVLGCPKLIASRMGWHLSSSTSLEYFGVGDADDESLPDIGLLPRTLTCLVFHSCPNLRSLQHKGLCHLSSLEILGFCGCPQLQYFPKEGLPSSLCQLQIVGCPLLKKQIQKRKGKFWAKISHIPFVSIEEDVIESLSELLSREGISFRSIPSLIRTLSESEHLMIVSTANCTSFTKSFLWERRSIFKAQKSINMKQGVILQILKVPFKAKALDIEQIVNDGNSACDDAEVDFFIEIYANVEEHEAKPIAIGLGHEIRKVESSEELQDQ 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1988g00031 1166 Gene3D - 128 212 IPR042197 -
Pral1988g00031 1166 Gene3D - 1 124 IPR027417 -
Pral1988g00031 1166 PRINTS Disease resistance protein signature 68 82 - -
Pral1988g00031 1166 PRINTS Disease resistance protein signature 166 180 - -
Pral1988g00031 1166 PRINTS Disease resistance protein signature 404 420 - -
Pral1988g00031 1166 SUPERFAMILY L domain-like 662 1018 - -
Pral1988g00031 1166 SUPERFAMILY L domain-like 289 711 - -
Pral1988g00031 1166 Gene3D - 213 301 IPR036388 -
Pral1988g00031 1166 Pfam NB-ARC domain 1 196 IPR002182 GO:0043531
Pral1988g00031 1166 FunFam Probable disease resistance protein At1g63360 214 300 - -
Pral1988g00031 1166 PANTHER DISEASE RESISTANCE PROTEIN RP 1 756 IPR044974 GO:0006952
Pral1988g00031 1166 Gene3D Ribonuclease Inhibitor 787 1022 IPR032675 -
Pral1988g00031 1166 ProSiteProfiles Leucine-rich repeat profile. 408 429 IPR001611 GO:0005515
Pral1988g00031 1166 Gene3D Ribonuclease Inhibitor 354 735 IPR032675 -
Pral1988g00031 1166 SMART LRR_typ_2 453 476 IPR003591 -
Pral1988g00031 1166 SMART LRR_typ_2 406 429 IPR003591 -
Pral1988g00031 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 228 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1988g00031 Pral-Chr1988 229598 237108 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1988g00031 1 617 WRKY Transcription Factor Family AT5G45050 22.987 4.99e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1988g00031 - - pcin:129316670 1256.12